Komagataella phaffii: PAS_chr3_1233
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Entry
PAS_chr3_1233 CDS
T01092
Name
(RefSeq) hypothetical protein
KO
K18715
nucleoporin NUP159
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_chr3_1233
Messenger RNA biogenesis [BR:
ppa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PAS_chr3_1233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
8199699
NCBI-ProteinID:
XP_002493106
UniProt:
C4R5U1
LinkDB
All DBs
Position
3:1696980..1700645
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AA seq
1221 aa
AA seq
DB search
MTVDIEETVTEDFGFRSITTGIKVAPALDTVPLKELNLLAWGNITKKFALSIGNTLLIGD
TSELDSYINLSTTEDEEKQAPVFEGGHRTEVSDVSQLVFNATETSLLASITNDLKRVEPS
SSEITNIESFDSPVRDIYASPFYSSVCAVLLEDRLVILDIDNVTNRLELPNVSSFSWSKA
DKSTFYTIIDNTIQRRTFDGTESEISQPDDIENSFRPLQVTSILKNDEELLFAVYGESIN
QDEHDYKHYIIGGSSEQKMLDVCPPYGSLPRLATYYLSQLKSWSPNWPDVVVVASSPSTD
IQAFTPEKLVNQLNDTDRAQLPLDEDSGEDDTPLGLAIDLTSTQEVLEPCNGIDNCKSLP
RVWVLTNQGNLLSWALFDAHGIKSDSLSNESALQSLRSYYETAKELPAVSFKDTNAAEKQ
TSSESQQDFRSDADLTSSTQPEDNKPLPASEQLSPPSEKKEATFFSSSGFTSKPAEPSGF
NSHGFSSSGFGSSGFGTSPFRSSNFSSTQGNAFSKDTGAFGSFKNGSTASEPFGKNAPAF
GSTGFGNNPSSSSPFAKLSQQGNKVLGSGSASTSSPFSKFATSNNSQSSPFASIASNKNN
NESIFSAEKSKGSIFDTSSKSASIFQKEDSQGTKKSIFELASTNVGQLKNADTKPKSESD
TDNELGSKLYQLRSPTFLRDLNSSSSSLTKQNGEPDNDLNSRMPPFVFKQKSIAGVKPED
LFGNTASNDNPFSSLNIKAKEINSAAESDSLNDVFSHKIAITSDPQKYTQENNSSKDTLS
VDEQNSEEEYDIPHGESDPDKSSESAELSVSVNSSEQEFGHTSDNKHPPTSLRDGSHSPH
GEQNVSREASSSENPSDDNEQLEYISKETEVADISKSGEHRISNDSSVSFAEGNRVSEPA
QDDSVTSDIEKRKSQTSTTAVTPFNEDSTPNKSDNSEGDSSSFEMVKVEDAKEETNEHSR
QRISFRNESTQMGLQSIGTETANIPMKNVAVGDDNSTLHASSTQTDDELTLSQKNIPMKV
PNYVTLGKIIMPQLDSDPIMNQIEQVCHQVESEFAILKTNSDNIGKFIEDHQSQELTHTE
LSLDYESYWRLNEAETIKGYVEDLSEQLEKDLADLKSVEQETLDQLSALKSQFSETNEVK
SRIYSLEEFKNVCESPAFLKQPLGYKMSESKRDINIKLGEVEHKLREAWTDTLKLKLQFT
KIENNKELSDEIYKSYFSMRF
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggacatagaggaaacagttactgaggactttggattcaggtcaatcaccaca
gggatcaaagttgcccctgctttagatacggttccattgaaggagttgaacctcctagcg
tggggaaacatcactaaaaagtttgccctctcaataggtaacacattactcattggtgat
acatcagaattagactcttacatcaacctctcaacgactgaagacgaagagaagcaagcg
ccggtatttgagggtggccatagaactgaggtttctgatgtgtcacagctggttttcaat
gccactgagacttcgcttcttgcttccatcaccaatgatttgaaaagggttgaaccatcc
agttctgagatcacgaacatcgaatcatttgactctcccgtcagggatatctatgcatct
ccattttactcatcagtttgtgccgttttgctagaagatcgtttggtcattctagacatt
gacaatgtaaccaacagattggaattacctaatgtgtcctcgttttcttggtctaaagcg
gataaatccacattttatacaattattgataatactattcaacgaaggacttttgatggt
accgaatcagagatttctcaaccagatgacatcgagaattcctttaggcccctacaagtc
acctcaatactgaaaaatgatgaggaactgttattcgctgtatatggagagagcatcaat
caagatgagcatgattacaaacactacattattggggggagtagtgaacaaaagatgcta
gatgtttgtcccccctatggctctcttccaaggctggccacatactacctaagccaactt
aaatcatggtctccaaactggccagatgtcgtcgtggtagcttcgtcaccatccacagat
attcaagcttttactccggaaaaactagtgaaccagcttaacgacacagacagggcccag
ctgcccttagacgaagactcaggagaagatgacacaccattaggacttgctatcgacttg
acctctacccaggaagtgctagaaccttgtaatgggattgataattgcaaatctttgcca
agagtttgggtgttgacgaaccagggtaatttactttcttgggcgttatttgatgctcac
ggcatcaagagtgattctttaagcaacgaaagtgcgttacaaagtcttcgttcatattac
gaaactgcaaaggaattaccggcagtgtcttttaaggatacaaatgccgcagaaaagcaa
acttcatctgaaagccaacaagatttcaggtcagatgctgacctcacatcatcaacgcag
ccagaagacaacaaacctcttcctgccagtgagcaactttctcctccttctgagaagaaa
gaagcaacattttttagctcctcaggctttacttcaaaacctgctgagccaagtggcttc
aattcacatggattcagctcttctggcttcggttcctctggatttggtacgtcacccttt
agaagctctaacttctcaagtacccaaggaaatgctttttccaaggatactggagctttt
ggaagctttaaaaatgggtcaacggcatccgaaccttttggaaagaacgcaccagctttt
ggttccactggttttgggaataacccatcgtcttcatctccatttgccaaactttctcaa
caaggcaataaagttttaggttcaggctctgcatctacttcctcacctttctcaaagttt
gctacctccaacaattctcaatcatctccgttcgcatcgattgcttctaataagaataat
aatgaaagcatatttagtgcagaaaaatccaaaggttcgatttttgatacttcaagcaaa
tctgcaagtattttccaaaaagaagactcgcagggtacaaagaaaagtatttttgagcta
gcatcaacaaacgtaggacaactgaagaatgctgatacgaaaccaaaatcagagagcgat
acggataatgaacttggaagtaaactttatcagttgagaagtccaacttttcttagggat
ctcaactcatcctcatcatctcttactaaacaaaacggcgagccagataatgaccttaat
agcagaatgccaccttttgtatttaaacaaaaaagcattgcaggtgtgaagcctgaagat
ctttttggaaatacagcttccaacgataaccctttttccagtttaaacattaaggcaaaa
gagataaactcggcagcagaatcggactctttgaatgatgtcttcagtcacaagatagca
atcacttcggatccccagaaatacacacaagaaaacaacagcagtaaagacacactatca
gtggatgaacagaattccgaagaagaatatgatataccacatggtgagtcagatcctgat
aaatcatcagagagtgctgagctatctgtttccgtaaatagctcagaacaagagtttggt
cacacctcagataacaaacatcctccgacttcattgagggacggcagtcattccccacat
ggcgagcaaaatgtatctagagaagcctcaagctcggaaaatccctccgatgataatgaa
cagttggagtacatttcaaaagaaacagaggttgctgatatatcaaaatctggcgaacat
agaatttctaatgattccagtgtttcttttgcagaaggaaaccgtgtttctgaacctgct
caggatgactctgttacttctgacatcgaaaaaagaaaatcccaaacgtcaaccactgcg
gtgacaccattcaatgaagattcaacgccaaacaagtcggataattcggaaggagatagc
agctcttttgaaatggtaaaagttgaagatgcaaaagaagaaacaaatgaacatagtaga
caacggatttccttccgaaatgagtctactcaaatgggcctacaaagtataggtacagaa
actgctaatatacctatgaaaaatgttgctgttggtgatgacaattctacattacatgca
agtagcactcaaacggatgatgagttgacactgagtcaaaagaatatacccatgaaagtt
cctaattatgtcactctaggtaaaataattatgccacagttagatagtgatcctatcatg
aatcaaattgagcaggtgtgtcaccaagtggaatctgagtttgccattttgaaaactaat
tcagacaacattggaaagttcattgaagaccaccaaagtcaagaattgactcacactgaa
ttatctcttgattatgaatcttattggcgtttgaatgaagctgagacgatcaaaggatat
gtggaggacttgtcggaacaattagagaaagacctggctgatctcaaatccgtcgaacag
gaaacactcgaccagctttcagctctcaagtcgcagttctcagaaacaaacgaggtcaaa
agtcgcatttattctttagaggagttcaagaatgtctgtgagagccccgcttttttgaag
caaccccttggttacaaaatgtcagaatctaaaagagacatcaacattaagctgggagaa
gtggaacataaactgcgcgaggcatggactgatactctgaaactaaagctccagtttacc
aagattgaaaataacaaagaattgtcagatgagatttataagagttacttctctatgcgg
ttttag
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