Komagataella phaffii: PAS_chr3_1247
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Entry
PAS_chr3_1247 CDS
T01092
Name
(RefSeq) hypothetical protein
KO
K14791
periodic tryptophan protein 1
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppa03009
]
PAS_chr3_1247
Ribosome biogenesis [BR:
ppa03009
]
Eukaryotic type
90S particles
Other 90S particles
PAS_chr3_1247
Pre-60S particles
Other pre-60S particles
PAS_chr3_1247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EIPR1
WDR55
WD40_RFWD3
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_WDR75_1st
PQQ_3
Beta-prop_Nup120_160
Beta-prop_RIG_1st
Beta-prop_VPS8
LppX_LprAFG
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
8199769
NCBI-ProteinID:
XP_002493266
UniProt:
C4R6A1
LinkDB
All DBs
Position
3:complement(1972100..1973857)
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AA seq
585 aa
AA seq
DB search
MISSTTWVPRGFPSEFPEKYEMNDVEMERIEAMANLKLKDAQDELAETQKDDSDISEMKA
NINKSIASKLQSQDDIDDDLKEYDLEHYDDDETYEDSVANGLKVSMLPGLSSTGARYHED
ENNADGDAYITLPTEREILEEKQELQVYPTDNMILSTRTEDDISFLDVYVYDDGAGAPDG
AEEEDGDKFDPDVARGMTRDPSLYVHHDIMLPSFPLCVEWLSYKPFGPNDNSNVANFAAV
GTLDPQIEIWNLDCVDKAFPDVILGEPEENSVAGLTKKKTKKNKKGSHVTTHHTDAVLSL
SHNRSFRSVLASCSADCTVKLWDLNQAQCVRSMNKIHQGKQISSSQWSEENGSILLTGGY
DGYVSLTDVRITEEKSMTKRFVVGSGNEEVETACWGPEKTVYAGTDQGNIYCLDIRAEKS
LWTLHAHDSGISTLDRNRFVDGLLATGAMGDKNLKLWNVPTSTNSGNPSMILSRDFGVGN
VLASSFAPDVEVAGFITIGGASGSLQIWDSLSNRTVRKSLGGQLKSLQDQARERAMELGR
SSRISRKYRTEHEQIMVPDAGEDDDDERLEAAPETEQVEVDDEFV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgtctacaacatgggttcccagaggcttcccctcggagtttcccgagaaatat
gaaatgaacgatgttgagatggagagaattgaagccatggccaatttgaaactgaaagat
gcccaggatgagctggccgaaacacagaaagatgattctgatatttcagaaatgaaagcc
aacatcaacaaatctatagctagcaaactacagtctcaagatgacattgatgatgatcta
aaggaatatgatttagaacattacgatgatgacgaaacgtatgaggattctgttgccaat
ggcctcaaagtctcgatgctacctgggttatcaagtacgggtgcccgttaccacgaagat
gagaacaacgcagatggtgacgcatacatcactcttccaacggaacgtgaaattttagaa
gagaaacaagagttgcaagtataccccacagacaatatgatcctttccaccagaactgaa
gacgatatctcctttttagatgtttacgtatacgacgacggtgctggagcccctgatggc
gctgaagaagaggacggcgacaaattcgatcctgatgtggcccgtggaatgaccagagat
cctagtttgtacgtacatcatgatatcatgttaccctcgtttcctctgtgtgtcgaatgg
ttgagttacaagccattcggaccaaatgacaatagcaatgttgccaactttgctgcagtt
ggtactttggatccccagattgaaatctggaacctggactgtgtagacaaggcttttcca
gacgtgattttgggcgagccagaagagaatagtgttgctggtcttaccaagaagaagact
aagaaaaacaagaaaggatctcatgtaactacccatcacactgatgcagttctttcttta
tctcataacagaagttttagatccgtgctagcttcttgttcagccgactgcacagttaaa
ttgtgggatttgaaccaagctcaatgtgttaggtccatgaataagattcatcagggtaaa
cagatatcttcctcccaatggagtgaagaaaatgggtccatactattgactggtggttat
gatgggtatgtatccttgacagacgtccgaattactgaagagaaatcaatgaccaaaaga
ttcgtggttggatcaggaaatgaagaagtggaaaccgcctgctggggacccgagaaaact
gtttatgcgggtaccgatcaaggtaacatctactgtttagatatcagagcagagaagtcg
ttatggactttacatgcacatgattcaggtatctccaccctggatcgtaatagatttgtg
gatggcttgctggcgacaggagctatgggagacaaaaacctcaagttgtggaatgttccg
acgtcaacgaactcaggaaatccttcgatgattctgagcagagattttggtgtgggtaac
gtgctcgcctcatcctttgccccagatgtcgaagtggcaggcttcattacgattggaggt
gcttccggatcactacaaatttgggattctctatcaaaccgcacagttagaaagagttta
ggtggccagttaaagagcttacaagatcaggccagagaacgagcaatggaattaggtcgc
agctctaggatcagtcgtaaatacagaaccgagcacgagcagattatggttcctgatgct
ggggaagatgacgatgatgaacgactggaagctgcaccagagacagagcaagtcgaagtt
gatgacgagtttgtatga
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