KEGG   Komagataella phaffii: PAS_chr3_1247
Entry
PAS_chr3_1247     CDS       T01092                                 
Name
(RefSeq) hypothetical protein
  KO
K14791  periodic tryptophan protein 1
Organism
ppa  Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppa03009]
    PAS_chr3_1247
Ribosome biogenesis [BR:ppa03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    PAS_chr3_1247
  Pre-60S particles
   Other pre-60S particles
    PAS_chr3_1247
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_EIPR1 WDR55 WD40_RFWD3 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_HPS5 Beta-prop_DCAF4 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_WDR75_1st PQQ_3 Beta-prop_Nup120_160 Beta-prop_RIG_1st Beta-prop_VPS8 LppX_LprAFG Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 8199769
NCBI-ProteinID: XP_002493266
UniProt: C4R6A1
LinkDB
Position
3:complement(1972100..1973857)
AA seq 585 aa
MISSTTWVPRGFPSEFPEKYEMNDVEMERIEAMANLKLKDAQDELAETQKDDSDISEMKA
NINKSIASKLQSQDDIDDDLKEYDLEHYDDDETYEDSVANGLKVSMLPGLSSTGARYHED
ENNADGDAYITLPTEREILEEKQELQVYPTDNMILSTRTEDDISFLDVYVYDDGAGAPDG
AEEEDGDKFDPDVARGMTRDPSLYVHHDIMLPSFPLCVEWLSYKPFGPNDNSNVANFAAV
GTLDPQIEIWNLDCVDKAFPDVILGEPEENSVAGLTKKKTKKNKKGSHVTTHHTDAVLSL
SHNRSFRSVLASCSADCTVKLWDLNQAQCVRSMNKIHQGKQISSSQWSEENGSILLTGGY
DGYVSLTDVRITEEKSMTKRFVVGSGNEEVETACWGPEKTVYAGTDQGNIYCLDIRAEKS
LWTLHAHDSGISTLDRNRFVDGLLATGAMGDKNLKLWNVPTSTNSGNPSMILSRDFGVGN
VLASSFAPDVEVAGFITIGGASGSLQIWDSLSNRTVRKSLGGQLKSLQDQARERAMELGR
SSRISRKYRTEHEQIMVPDAGEDDDDERLEAAPETEQVEVDDEFV
NT seq 1758 nt   +upstreamnt  +downstreamnt
atgatttcgtctacaacatgggttcccagaggcttcccctcggagtttcccgagaaatat
gaaatgaacgatgttgagatggagagaattgaagccatggccaatttgaaactgaaagat
gcccaggatgagctggccgaaacacagaaagatgattctgatatttcagaaatgaaagcc
aacatcaacaaatctatagctagcaaactacagtctcaagatgacattgatgatgatcta
aaggaatatgatttagaacattacgatgatgacgaaacgtatgaggattctgttgccaat
ggcctcaaagtctcgatgctacctgggttatcaagtacgggtgcccgttaccacgaagat
gagaacaacgcagatggtgacgcatacatcactcttccaacggaacgtgaaattttagaa
gagaaacaagagttgcaagtataccccacagacaatatgatcctttccaccagaactgaa
gacgatatctcctttttagatgtttacgtatacgacgacggtgctggagcccctgatggc
gctgaagaagaggacggcgacaaattcgatcctgatgtggcccgtggaatgaccagagat
cctagtttgtacgtacatcatgatatcatgttaccctcgtttcctctgtgtgtcgaatgg
ttgagttacaagccattcggaccaaatgacaatagcaatgttgccaactttgctgcagtt
ggtactttggatccccagattgaaatctggaacctggactgtgtagacaaggcttttcca
gacgtgattttgggcgagccagaagagaatagtgttgctggtcttaccaagaagaagact
aagaaaaacaagaaaggatctcatgtaactacccatcacactgatgcagttctttcttta
tctcataacagaagttttagatccgtgctagcttcttgttcagccgactgcacagttaaa
ttgtgggatttgaaccaagctcaatgtgttaggtccatgaataagattcatcagggtaaa
cagatatcttcctcccaatggagtgaagaaaatgggtccatactattgactggtggttat
gatgggtatgtatccttgacagacgtccgaattactgaagagaaatcaatgaccaaaaga
ttcgtggttggatcaggaaatgaagaagtggaaaccgcctgctggggacccgagaaaact
gtttatgcgggtaccgatcaaggtaacatctactgtttagatatcagagcagagaagtcg
ttatggactttacatgcacatgattcaggtatctccaccctggatcgtaatagatttgtg
gatggcttgctggcgacaggagctatgggagacaaaaacctcaagttgtggaatgttccg
acgtcaacgaactcaggaaatccttcgatgattctgagcagagattttggtgtgggtaac
gtgctcgcctcatcctttgccccagatgtcgaagtggcaggcttcattacgattggaggt
gcttccggatcactacaaatttgggattctctatcaaaccgcacagttagaaagagttta
ggtggccagttaaagagcttacaagatcaggccagagaacgagcaatggaattaggtcgc
agctctaggatcagtcgtaaatacagaaccgagcacgagcagattatggttcctgatgct
ggggaagatgacgatgatgaacgactggaagctgcaccagagacagagcaagtcgaagtt
gatgacgagtttgtatga

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