Komagataella phaffii: PAS_chr4_0098
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Entry
PAS_chr4_0098 CDS
T01092
Name
(RefSeq) Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppa03016
]
PAS_chr4_0098
Enzymes [BR:
ppa01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
PAS_chr4_0098
Transfer RNA biogenesis [BR:
ppa03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
PAS_chr4_0098
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GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_10
Acetyltransf_1
Acetyltransf_7
Motif
Other DBs
NCBI-GeneID:
8201184
NCBI-ProteinID:
XP_002493503
UniProt:
C4R6U9
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Position
4:194369..196039
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AA seq
556 aa
AA seq
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MAVGMQVTKSKQKMAPEKERFLQCCGDISMELVASLKNSKDIHLNGLITRYSKKYKLKQQ
PRLTDIISSIPDQYKKYLIPKLKAKPVRTASGIAVVAVMCKPHRCPHIAYTGNICVYCPG
GPDSDFEYSTQSYTGYEPTSMRAIRARYDPYEQARGRIEQLRQLGHSIDKVEYIIMGGTF
MSLPVDYREGFITQLHNALTGYNGKDIDEAIKFSQQSLTKCVGITIETRPDYCTETHLSD
MLKYGCTRLEIGVQSVYEDVARDTNRGHTVKAVCETFGYSKDAGYKVVSHMMPDLPNVGM
ERDLEQFKEYFESPAFRTDGLKLYPTLVIRGTGLYELWKTGRYRSYNANALIDLVARIMA
LVPPWTRIYRVQRDIPMPLVTSGVENGNLRELALARMKDFGTSCRDVRTREVGIQEVHHK
VQPDQVELIRRDYYANGGWETFLSYEDPKQDILIGLLRLRKCSKKYTFRKEFTSQPTSVV
RELHVYGSVVPLHSRDPRKFQHQGFGTLLMEEAARIAKEEHGSEKLSVISGVGVRNYYAR
LGYTLDGPYMSKSLID
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgggaatgcaagtcacaaagtccaaacaaaaaatggctccagaaaaggagcgg
ttcttgcaatgctgtggtgacatttctatggaactggtggcttctcttaagaactcaaaa
gatattcatttgaatggtttgataaccagatactctaaaaaatacaaattgaaacaacaa
ccaagactcacggacattatctcatccattccagatcaatacaagaagtatctaattcct
aaattgaaggccaaacctgttagaactgcctccggtattgctgtcgttgcagtaatgtgc
aaacctcatcgctgtcctcatattgcttacactggtaacatttgtgtttactgtcctggt
ggtccggattctgactttgaatacagtacacaatcatacacaggttacgagccaacatca
atgagggccatcagagctcgttatgatccatacgagcaggctcgtggtagaatcgaacag
ttacgtcagctaggacactcgatagacaaagttgagtatattataatgggaggtactttc
atgtccttacctgtagattacagagagggatttataacccaactacataatgctcttacg
ggctacaatgggaaggatatcgacgaggcaataaagttttcacagcaatcacttaccaaa
tgtgtggggattacaattgaaaccagaccagactactgtacagaaacccatcttagcgac
atgttaaaatacgggtgcacccgtttggagattggtgttcaatctgtttatgaagatgtt
gcacgcgatactaacagaggtcacaccgtcaaagctgtatgtgaaaccttcggttactcc
aaagatgctgggtataaggttgtcagccatatgatgcctgatctgcccaacgtcggcatg
gaaagagatttagaacagttcaaagagtactttgaaagcccagcttttaggacggatggg
cttaagctgtatccaactttggtcattcggggaactggtctctatgaactttggaagact
ggacgttacagatcttacaacgccaatgcccttattgatctagtggctaggattatggca
ttagttcctccttggacccgtatttacagagttcaaagagatattcctatgcctttggtg
acgagtggtgttgagaatggaaatcttcgtgaattggctcttgctcgtatgaaagacttt
ggtacttcatgtcgtgatgtcagaacgagagaagtcggaatacaggaagtgcatcataaa
gtgcagccagatcaagtggaattaataagaagagattactacgccaatggaggttgggaa
actttccttagttacgaggacccaaagcaagatattcttattggtttactgagattaaga
aagtgctctaagaagtacaccttcagaaaagagtttaccagtcaaccaacgtctgttgtc
agagagctgcatgtctatgggtctgtagtcccgctacattcaagagacccaagaaagttc
caacatcagggtttcggcactctgctgatggaagaggcagcacgtattgccaaagaggaa
cacggttctgaaaagctcagtgttattagtggagtcggcgttagaaactactacgctcgt
ctaggttacactttggatggcccatatatgtccaaatcattgatagactaa
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