Komagataella phaffii: PAS_chr4_0109
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Entry
PAS_chr4_0109 CDS
T01092
Name
(RefSeq) Component of the condensin complex, essential SMC chromosomal ATPase family member
KO
K06674
structural maintenance of chromosome 2
Organism
ppa
Komagataella phaffii
Pathway
ppa04111
Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
PAS_chr4_0109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppa03036
]
PAS_chr4_0109
Chromosome and associated proteins [BR:
ppa03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
PAS_chr4_0109
Condensin II
PAS_chr4_0109
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ODAD1_CC
ACBP4_C
ABC_tran
Motif
Other DBs
NCBI-GeneID:
8201196
NCBI-ProteinID:
XP_002493514
UniProt:
C4R6W0
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Position
4:join(213500..215393,215498..217005)
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AA seq
1133 aa
AA seq
DB search
MKVEELIIDGFKSYATRTVISGWDSQFNAITGLNGSGKSNILDAICFVLGISSMTTVRAS
NLQDLIYKRGQAGVTKASVTIVFDNSDTDKSPIGFEKLPSISVTRQIVLGGTSKYLINGH
RAQQQTVLQLFQSVQLNINNPNFLIMQGKITKVLNMKPTEILSLIEEAAGTKMYEDRREK
AEKTMSKKDVKLREIRSLLEEEITPKLDKLANERRVFLEFQQIQTDLEKLTRVVAAHDYK
DSSKKYDHQRRLLDKQKGLLGELESSIEQLEKESKSIHEEINRIKEKRKTELSNNASVKE
LEKQETIISNELARLVTSHQIKLDTIKSTNSLKQKHKSQIKQMETTIEKLKEKTTLLEKE
YQNSKDSLTKLKQNHSKREDLLSSLSTGISSQGISTTGYASQLRDAKKKHSDALLSQEQL
NMQSLHLQKEIETEKTAVLEAEKENKVLTDELERKGQEYCTITQKLNELGFHPSNITNLQ
QQKSKIEQQIYKATNELENSKRRVANLDFHFANPSPQFDRRSVKGTVAQLFTVDEKNMKS
VSALEVCAGGKLYNVVVDTQETASQLLKGGQLKKRVTFIPLNKISAYCIDPRKVQQAKEL
CPGKVELALNLITYDKDVEAAMKFTFGGRLVCGSRNNVGVMLTTVQKCKNIEREIANMKK
ELLEMNEKQKQQQGIVKQTESLQQKANKLKHEISLGKKNQESHHSTITIRKNAQNISQLE
EINEKLNNQNTIVLKLTEEIAQIEKDIQEFGSDKSSKLKQLADEVKSLASQIPKAEETMN
LKYSDYQQSLLDLEKMKGDLDDLNSGVQEKDVSQLNAECDEIKQQMTNQEQELDKVRGKL
EDERQKLLNLNDELDDLNNELSTKHKLINENKLETQKLSHEIEKVKSVCKAYKQTVENLI
KENEWVSDSNIVEKLIEENPSINVHECYERIDQLKGVFQGMKRKVNSNIMSIIENVEKKE
GSLKQMIRTIEKDKAKIEETINKLNEYKKITLIETWKKVSEDFGNIFRDLLPNSFAKLVP
PENKDVTDGLEVKVMLGKVWKESLVELSGGQRSLIALSLILALLQFKPAPMYILDEVDAA
LDLSHTQNIGHLIKTRFKGSQFIVVSLKEGMFTNANRVFRTRFQDGTSVVSAT
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtagaggagttgattattgacgggttcaagtcttacgccacaagaacggttatt
tctgggtgggactcgcagttcaatgcgatcactgggctgaatgggtccggtaaatcgaac
attttggacgccatttgctttgttttgggtatatcaagtatgaccacggtgagagcgtcc
aatttgcaggatctgatctacaaaaggggtcaggccggtgtgacaaaagcaagcgtgact
atagtgtttgacaactctgacactgacaaatctccaattgggttcgagaagctccccagt
atcagtgtgaccaggcagatcgtgctgggaggcacttccaaataccttatcaatggtcac
agagcacagcagcaaactgtattgcaactttttcaaagcgttcagctgaacatcaataac
cccaatttcttgattatgcagggtaagattaccaaggtgttgaatatgaagccaacagag
attctttcgctcattgaagaggcagctggaaccaaaatgtatgaagatcgtagagaaaag
gcggagaaaaccatgtccaagaaggatgtcaagctacgagagattcgatctcttttggag
gaggaaattaccccaaagcttgataaattggccaatgaaagaagagttttcctggaattt
cagcaaattcaaacagatctggagaaattgacgcgggtagttgctgctcacgattataaa
gactcttcaaagaaatacgatcatcaacgcagactcctcgataagcaaaaaggtttattg
ggagagctggagtcaagtattgaacaattggagaaagaatcaaagtccatccacgaagaa
ataaatcgcatcaaagaaaagagaaaaaccgagctctccaacaatgcatctgtaaaagaa
ttggaaaaacaggaaactatcatctccaatgagttggctcggttggtaacgtcacatcag
ataaagctagatactataaaatcaacgaactcgttgaaacaaaagcacaaatcgcaaatc
aagcagatggaaacgacaattgaaaagttgaaagaaaaaactacattacttgaaaaagaa
taccaaaattccaaagactcgttaacgaaactgaagcaaaaccactcaaagagggaggat
ttgctttcttcattatctacaggaatatcgtcacaaggtatttcgactactggatacgct
tcccagttacgagacgcaaagaagaaacactctgatgctttactgtctcaagagcagcta
aacatgcagtccttacacctacaaaaggaaattgaaactgaaaaaaccgcagttcttgaa
gcagaaaaagaaaacaaagttttgacggatgaattagaacgtaaggggcaagagtactgt
acaataactcaaaaattaaatgagctgggatttcatccctctaatataaccaatcttcaa
cagcagaagagcaaaattgaacagcaaatatataaagctacaaatgagttggaaaactct
aaacgaagagtagctaacttagatttccattttgccaatccatccccacaatttgaccga
agatctgtcaagggcactgttgctcagttattcactgttgacgaaaagaatatgaaatct
gtgtctgcacttgaagtatgtgcgggtggtaaactctataatgttgttgttgatactcaa
gaaactgccagtcaacttttgaagggggggcagctaaagaagcgagtaactttcattccg
ttaaacaagatttctgcatactgcattgatccacgaaaagttcagcaagccaaagaactc
tgtcctggaaaagttgaactagcattgaatctcattacgtatgacaaagatgtagaggcg
gcaatgaagtttacgtttggtgggcgtcttgtttgtggttcaagaaacaacgtcggtgtg
atgttgaccactgtacaaaaatgcaaaaacattgagagagaaattgctaacatgaagaaa
gagcttttagaaatgaatgagaaacagaaacaacaacaggggattgtgaagcagacggag
tctttacaacagaaagcaaacaagttgaaacatgagatatcattaggtaaaaagaaccaa
gagtctcatcactccaccataacgatacggaaaaatgcacagaatattagtcagctggaa
gaaataaacgaaaagttgaacaaccaaaacactatagttttaaaattgacggaagaaatt
gctcaaattgaaaaggatatccaagaatttggctctgataaatcttcgaagttgaaacaa
ttagcagatgaggtaaaatctctagcatcccagataccaaaagctgaagagaccatgaac
ttaaagtattcagactatcaacagtctttgcttgatttagagaaaatgaaaggtgacctt
gatgatctgaattctggtgttcaggagaaagacgtttctcagttgaatgctgaatgcgat
gaaataaaacagcaaatgacgaatcaagaacaagaacttgataaagtaagaggcaagtta
gaggatgaaaggcaaaagcttctgaatctcaatgatgagttagatgatctcaataacgaa
ttgagcaccaagcacaagcttataaatgagaataaactggagacccagaagttatcccat
gaaattgaaaaggtcaagtccgtctgcaaggcatataaacaaacggttgaaaacttgatt
aaagaaaatgagtgggtttcggactccaatatcgtggaaaagttaattgaagagaatcct
agtattaatgttcatgaatgctacgaacgaatagatcagctaaagggtgtatttcagggt
atgaaacggaaagtgaattcaaacattatgtctattattgaaaacgtggaaaagaaagag
ggatctttgaagcagatgattcgaactatcgaaaaagataaagccaaaatcgaagagacg
atcaacaagttgaatgaatataaaaaaatcacactgattgaaacttggaagaaagtgtca
gaggattttggaaacatcttcagagatctattgcccaattcttttgctaaactggtgcca
cccgagaacaaagatgttacagatggattagaagttaaggttatgctgggtaaggtgtgg
aaggagtcattagtggaactctctggaggtcaaaggtcgttgattgcattatcattaatt
ttggcattgttgcaatttaaaccagctccaatgtacattctcgatgaagtggacgcagct
ttggatctaagtcacactcaaaatattggacatttaatcaaaacaaggtttaaaggctcg
cagttcattgttgtatctttgaaagaaggaatgttcaccaatgccaacagagtgtttaga
acaagatttcaagatggtacttcagtagttagcgccacctag
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