Komagataella phaffii: PAS_chr4_0115
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Entry
PAS_chr4_0115 CDS
T01092
Name
(RefSeq) Minor isoform of tropomyosin, binds to and stabilizes actin cables and filaments
KO
K17945
tropomyosin, fungi type
Organism
ppa
Komagataella phaffii
Pathway
ppa04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
PAS_chr4_0115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppa04131
]
PAS_chr4_0115
03029 Mitochondrial biogenesis [BR:
ppa03029
]
PAS_chr4_0115
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppa04812
]
PAS_chr4_0115
Membrane trafficking [BR:
ppa04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
PAS_chr4_0115
Mitochondrial biogenesis [BR:
ppa03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
PAS_chr4_0115
Cytoskeleton proteins [BR:
ppa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
PAS_chr4_0115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
ATG16
Taxilin
Laminin_II
MbeD_MobD
GAS
MIS13
PI3K_P85_iSH2
CENP-F_leu_zip
TMF_DNA_bd
WXG100
DUF4795
Rho_Binding
DUF5798
FapA
NPV_P10
FliD_C
Prefoldin
Crescentin
DUF1799
Uso1_p115_C
EzrA
Nuf2_DHR10-like
BRE1
DUF4200
Filament
Fez1
COG4_N
Laminin_I
Transketolase_N
Sec10_N
DUF1664
ATG17_like
PilJ
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
8201322
NCBI-ProteinID:
XP_002493520
UniProt:
C4R6W6
LinkDB
All DBs
Position
4:join(225640..225657,225714..226181)
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AA seq
161 aa
AA seq
DB search
MDKLKEKINKLKLDAETWQEKHDDVNSKIKVLEQEALEKDHQIQALTRKNDVLEEQVEKL
EEQLSTSKETVNESHSLKTNNENITKKNQLLEEELEAADKNLKETTEKLRDTDIKAEALE
KKVTSLENEREEWERKFEELQEKYNATREELDAISEQLENL
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atggataaacttaaggaaaaaatcaacaagctcaaattggacgctgagacctggcaagaa
aagcacgatgatgtcaacagtaagatcaaagtgcttgaacaagaggccctagagaaagac
caccagatccaagcgctcacccgcaagaacgacgttttggaagagcaggtggagaagttg
gaggagcaattgagcaccagcaaggaaactgtcaacgaatctcactccctcaagaccaac
aatgaaaacatcacgaagaagaaccaattgctcgaggaggaattggaagctgccgataag
aacttgaaggagaccactgagaagctaagagacaccgatatcaaggccgaagctttggag
aagaaggtcacctctctggagaacgagagagaagaatgggagagaaagtttgaggagttg
caagagaagtacaacgccaccagagaggaattggatgccatctccgagcaattggagaat
ttgtga
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integrated database retrieval system
