KEGG   Komagataella phaffii: PAS_chr4_0118
Entry
PAS_chr4_0118     CDS       T01092                                 
Name
(RefSeq) DNA repair and TFIIH regulator
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
ppa  Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:ppa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ppa03036]
    PAS_chr4_0118
   03400 DNA repair and recombination proteins [BR:ppa03400]
    PAS_chr4_0118
Chromosome and associated proteins [BR:ppa03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    PAS_chr4_0118
DNA repair and recombination proteins [BR:ppa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     PAS_chr4_0118
SSDB
Motif
Pfam: MMS19_C MMS19_N HEAT_EZ SpoIIE Ipi1_N TMTC_DUF1736
Other DBs
NCBI-GeneID: 8201204
NCBI-ProteinID: XP_002493523
UniProt: C4R6W9
LinkDB
Position
4:complement(228154..231180)
AA seq 1008 aa
MDLQLSQWVSQFMASENDPPCEEIAKAVIEKRISLLQLIKTLGSHLTDETPHIRSTAVGC
LSNTLAKIERLNRADIEVIAKFYIGKLDDNDVMSNTLVGLRALTSLKNFNPALLESVLTS
VQEKYEPASFLAATRYQSFLLLETIYQKHLDFILANLNDLFVKVFIHISTNEKDPRNLLI
SFSLNKQISSTLQVENFAEDLFDNAFCYFPVSFKPPPNSPYSIASHDLKTGLRQVFAATP
LFAKDLFPNILEKLTSTSPAVKLDVLQTLNLCLDTYDNDTIQEYWLTLYNALKFEVLYND
LANIVELADIEKLSTEDDLVFKEVIALFKNLPKKFTDEQIIKNLQIMLEELKEYLHISHK
YFKQTVLLLSVMATSKLSVYNHIVGEVLPVLLTDEPSTVVDEKNLATALNFFINPDYPES
KLSQYKDDILVVLSKGLMSSSNVETTLKCICIRSLVNLSFILDTQEVASVISNLSELLLS
TMKNEKDPIFQETLNAFTNISATMPNVVLETTLPLLLSKLPNESSSEIDLELVRNVLNVV
VNISHSKLLLDSIIVRLLSVYERLLNGRVVTMDYYYFLLNSIYLLLSNYPELLSKDYADR
VIPQITSLTIVNYRLSKESPVYLNERILDQCGKIIRLIICKLELIHHQKILDDAVDTFLL
GSDSPLFSTSLGLEISLVSKPPTLVSLFNKFLSAVSKDCPLKIEPLDVLSSLVEITRDSK
HFESLFERMGFLELICLLANKYISDSDLEKILNELSETIDLQSSDSLGTLEVMAWITKSL
VLSNSPLAMKYQEYFFSLLEIPSVASVSPKLLEVLIAEVSELEVNKRDKKIINLNVRLLY
KQKFYNIMLPKIIEGYRNCEQASKETYLLLLSLILNHVHQREIILSHLENILPLILQIIQ
SDNAKSRNSGLEILNLTIESNCMLIKPHLHSIISRLLAITKDNSDLNGQINALLCLKEIG
ISKIPLSQLQPFRTTIINQTVAVLSHKKRKVRKLAADVRQIYYELEQS
NT seq 3027 nt   +upstreamnt  +downstreamnt
atggaccttcagctaagccaatgggtaagccagtttatggcctcagaaaatgatccacct
tgcgaagaaattgcaaaggccgtcatagaaaagcgaataagtcttttgcaattaataaaa
acccttggatcacatctcactgacgaaacaccccatataagaagtacggctgttggatgt
ttgagcaataccttggccaagattgagcgactgaaccgggctgatatagaggttattgct
aagttttatattgggaaattggacgacaatgatgtgatgagtaacacattggttggtctt
agggctttgacatctttgaagaatttcaatcctgctctgttagaatccgtgctaacttca
gtgcaagagaaatatgaaccggcaagctttttggctgctacaagataccagtcctttcta
cttttggaaacaatatatcagaagcatttggatttcatcctggccaacctcaacgatctt
tttgttaaggtgttcattcacatttctaccaatgaaaaggatcctagaaacctactaatc
tctttcagtttgaacaagcagatatcctcaacattacaggtggaaaatttcgccgaggat
ttgtttgataatgcattttgttacttcccagtctcatttaaaccccctccaaatagtccc
tatagcatcgccagtcatgacttgaaaacaggcctcagacaggtctttgcagccacaccg
ttgtttgcaaaggatttgtttcccaatatcttggagaaattaacctcaacgtctccagca
gtgaagttggatgttcttcaaactttgaatctgtgtctggatacgtacgacaatgacacc
attcaagagtactggcttactttgtacaatgccctcaagtttgaggttttgtacaatgat
ttagcaaatattgttgagttggccgatatagagaaattgagcactgaagatgacttggtg
ttcaaagaagtcattgccctattcaaaaatctccctaaaaaattcacagatgagcaaatc
atcaaaaaccttcagatcatgctggaagagcttaaggaatatctccacatttctcacaaa
tacttcaaacaaacagttttactcctctcagtcatggctacgtctaaactttccgtgtat
aaccacattgttggcgaagtgctacctgttttgctaacggatgagccgtctaccgttgta
gacgaaaagaatttggccacagccttaaacttttttattaatccagattacccagagtca
aagctttcccagtacaaggatgacatcttggtagtattatcaaaaggtttaatgtcttca
tctaacgtggaaacaacactgaaatgcatctgcatccgttcactagttaatttgtcattc
attttggatacacaggaagttgcgtcagttatttctaatttgtcggagctacttctttca
actatgaaaaatgagaaggatccaattttccaagagactctgaatgcatttacaaatatc
tctgctacaatgccgaatgttgttttagagacaactcttccattattattatctaaactt
ccaaacgaatcatcttctgagattgatttggaactagttcgaaacgtcttgaacgttgta
gtgaacatttcccatagcaaactattattggactcgataatcgtgagactattgagcgta
tatgaaagactgttgaatgggagggttgttaccatggattactattattttttgttgaac
tccatttacttattactttccaattatccagagctgctgtcaaaagactacgcagaccga
gtcattcctcagataacttctttgactatagtcaactaccggctctccaaagagtctcct
gtttatttaaatgaaaggatattagatcaatgtgggaagataatcagactaattatttgt
aaacttgaactgatacatcatcagaaaatccttgatgatgcagttgatacatttttgcta
ggatcggattctcccctgttttcaacaagtttaggattagaaatttccctagtttctaag
ccccctacattggtgagtttattcaacaaatttttaagtgcagtatctaaggactgtcct
ctcaagattgagcctttggatgtgttaagttcattagttgagatcacaagagattcgaaa
cacttcgaatcgcttttcgagagaatgggtttccttgagcttatctgccttttggctaac
aaatacatttccgattcggatttggagaaaattttgaatgagttatcggaaacgatagac
cttcaatcttctgatagtttgggaacattggaagttatggcatggattacaaagtcctta
gttctatcaaacagtccattggcaatgaagtatcaagaatacttcttttcactccttgaa
atcccatcagttgcatcggtttcgccgaagttgttggaggttctaatcgcagaagtcagt
gaattggaagtgaataaacgtgacaaaaaaatcataaatctcaatgttcgtttactgtac
aaacaaaagttctacaacatcatgcttccgaaaatcattgaaggttataggaattgtgag
caggcatcaaaagaaacatatctacttttattatcgttgatcttgaaccatgttcatcaa
agagaaatcattctatctcacctggagaatatcttaccactgattcttcaaattattcaa
agtgacaatgctaaatccagaaattcaggcctggagatattaaatctaactattgaatcc
aactgtatgcttataaagcctcatctacattcaattatttcaagattgttggctatcacc
aaggacaacagtgacctgaacggccaaatcaatgcgttactatgcttgaaggagattggt
attagtaagattcctctcagtcaattacaacctttccgaaccactatcatcaaccaaaca
gttgcagtcttgagtcacaaaaagagaaaagttaggaaattagccgcagatgtaaggcag
atctattatgaattggaacagagctaa

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