| Entry |
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| Name |
(RefSeq) ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase
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| KO |
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| Organism |
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| Brite |
KEGG Orthology (KO) [BR:ppa00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ppa03019]
PAS_chr4_0140
03041 Spliceosome [BR:ppa03041]
PAS_chr4_0140
03036 Chromosome and associated proteins [BR:ppa03036]
PAS_chr4_0140
Enzymes [BR:ppa01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PAS_chr4_0140
Messenger RNA biogenesis [BR:ppa03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PAS_chr4_0140
mRNA cycle factors
Common to processing body (P body) and stress granule
PAS_chr4_0140
Spliceosome [BR:ppa03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
PAS_chr4_0140
Chromosome and associated proteins [BR:ppa03036]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
PAS_chr4_0140
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4:complement(276239..278059)
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| AA seq |
606 aa
MSELEDSMNNLNVNEGGRQSKSNYVPPHRRNGQGSSAFANNGSRGGGFGGRGRDNFSAGR
GGGRNGMNFRGGRGRGPTRGQGRWVQGKHVPAPKDEELELKMFGTPEDPSFQSSGLNFDN
YDDIPVEATGEDVPEPITQFTSPPLDELLLENIKLSRFTKPTPVQKYSVPIVSNHRDLMA
CAQTGSGKTGGFLFPVLSECFQTGPAPIEVESETVFRKHRAYPTILVMAPTRELVSQIYD
EAKKFAYRSWMRPCVVYGGANIRDQMEDLILGCDLLVATPGRLSDLLERGKISLAKIKYL
ILDEADRMLDMGFEPQIRHIVQGCDMPSVNERHTLMFSATFPRDIQLLAKDFLKDYIFLS
VGRVGSTSENITQRVLSVEDDEKKSVLLDILSSSDDIKEGLTLIFVETKRMADTLSHFLV
TRNFPATSIHGDRTQQEREHALHLFKSGAAPILVATAVAARGLDIPNVTHVVNYDLPADI
DDYVHRIGRTGRAGNVGIATAFVNRGNKNLIKGLIELLTEANQEVPQFLSALSREATMGR
GGARGGRGGRNAYGKDFRRSSNYPPQPSSQTYGRANGGSGYFGGSNFYGSAPSSNTTQQS
SGSDWW |
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| NT seq |
1821 nt +upstreamnt +downstreamnt
atgtctgaattagaagattcaatgaacaacttaaatgttaacgaaggtggccgtcagtcc
aagagcaactacgtcccaccacacagaagaaacggtcaagggtcctcggcttttgcaaac
aatggatcccgtggtggcggtttcggtggcagaggaagagataacttctctgctggccgt
ggcggcggcagaaacgggatgaacttcagaggcggcagaggaagagggcccacaagaggc
caaggccgttgggttcaaggtaaacacgtccctgctccaaaagacgaagaactggaatta
aagatgtttggaactccagaggatccatccttccagtcgtccggtttgaactttgacaac
tacgacgatatcccagtcgaagccaccggtgaagacgtccctgaaccaatcacccaattc
accagccctcctttggacgagctgttattggaaaacattaaactttccaggtttactaag
cctactccagtgcaaaaatactccgtcccaatcgtttctaatcacagagatcttatggct
tgtgcccagaccggttccggtaagactggtggattcttattccccgttttatctgagtgt
ttccaaacaggcccagcacctatcgaagtcgagtcggagaccgttttccgcaagcacaga
gcctatccaactattttagtcatggctccaacaagagagctggtctcccagatctacgat
gaggctaagaagtttgcctacagatcatggatgagaccttgcgtagtatatggtggtgct
aacatccgtgaccaaatggaagacttaatcctcggttgtgatcttttggtcgccactcct
ggtagattgagtgatcttttagaacgtggaaagatatcgcttgctaagattaaatacctc
attttggatgaggctgacagaatgttggatatgggtttcgaaccacagattagacacatt
gtccaaggttgtgatatgccttctgtcaatgagagacacaccctcatgttctctgctact
ttccctagagatattcagttattggccaaggacttcctgaaggactacattttcctttca
gtcggtcgtgttggttccacatccgagaacattacacaaagagttctttctgtcgaagac
gacgaaaagaaatccgtcttgctggacattttgtcctcttcagacgacataaaggaaggt
ctgacccttatctttgttgaaacaaagagaatggcagacactttgtcccacttcttagtc
acaagaaacttccctgccacctccattcatggtgacagaacacaacaagagagagagcat
gctcttcacttatttaaatctggtgctgctccaattttggttgccactgcagttgccgcc
agaggtttagacattccaaatgtcacacacgttgtcaactacgatctaccagctgacatt
gacgattacgtccatcgtattggtcgtaccggtcgtgctggtaatgttggtattgccact
gcattcgttaaccgcggtaacaagaacctgatcaagggtttaattgaactgttaaccgag
gctaaccaagaagttcctcaattcctgagcgccctttccagagaagctactatgggtaga
ggcggagccagaggtggaagaggcggaagaaacgcttacggaaaagatttcagaagatct
tctaactacccgcctcagccaagttcccaaacttatggtagggctaatggaggaagtggt
tacttcggtggttctaacttctacggtagtgctccaagcagcaacactactcaacaatcg
tctggttctgattggtggtaa |
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