Komagataella phaffii: PAS_chr4_0143
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Entry
PAS_chr4_0143 CDS
T01092
Name
(RefSeq) Swi2/Snf2-related ATPase that is the structural component of the SWR1 complex
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
ppa
Komagataella phaffii
Pathway
ppa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PAS_chr4_0143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppa03036
]
PAS_chr4_0143
Chromosome and associated proteins [BR:
ppa03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
PAS_chr4_0143
SWR1 complex
PAS_chr4_0143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HSA
DEAD
DUF7696
Motif
Other DBs
NCBI-GeneID:
8201054
NCBI-ProteinID:
XP_002493548
UniProt:
C4R6Z4
LinkDB
All DBs
Position
4:280513..285264
Genome browser
AA seq
1583 aa
AA seq
DB search
MPRSLARLRSTDNLPTRSSSPDTDSPGANGGKIRAISEVQSDNESAATKRRRTRLRSRDS
PVNYSLKSYKRVSARPNDAHPSYLKESDKPLESVLKHIDQNLPKEQADKLHKENLCDILQ
AQEKTLDELFVLQNFTFLTDFDQINRSSEIYRALIDENNLWNTLAPENVNGRGTKRVHSR
RRATSNLSGQESKLIEEVQDMLLERRRRLKTSAGKTNGISQTHPKKTNKHQVFETSISKK
AVVSRPTSVSEHRGKKARKHMEEKVHAQQQESDEQSGSDDTMQHGEDSETVSSLSDSPVE
QSSLGHLPKKVHLNFTIPKQIVTHPDHLTKPEYGGNLGNLLASFYSLDDDMEPSQFQDYI
SLQRDLVERIRKGVNDKFLKIDYSENVNKPHVQGTTREPTMIKLNSVHHRYKDPFRTQLF
PHLHYDHLLAHGVFYSKLLHDRRVSRIQKAKKVANMIDSHFKKLSQSKEREEKENQIRVI
KLARRVAKLVKNRWLQAEKVFRILEDREKEKERIKESKQHLSKILEHSTQLLEAQMNRAT
SASASELPSASGSDIGSSTNTDDENMSTSNDEEEEDANDEKHMKVDSSQDDSNLTVEELR
EKYKHLSHVNNEEEIVEDQNIELTAEEKRLLDEETKKVNPLFDSDDESESEISEDSEDMS
MESITDEDDQNGGTDLNGSSGLASLFGQVKEEEDSDDESVKSDIEESDQEEKIKVEKHNI
LSSNSDSVVTKKSKSEASDEFTNEQVNSVIDVPVPHLLRGTLRVYQKQGLNWLASLYNNN
TNGILADEMGLGKTIQTIALLSYLACEKHVWGPHLIIVPTSVMLNWEMEFKRFAPGFKVM
TYYGNPQQRKEKRRGWNKPDSFHMCITSYQLVIQDHFVFRRKKWKYMILDEAHNIKNFRS
QRWQALLNFNTEHRLLLTGTPLQNNIMELWSLLYFLMPSSKADNKQSMPAGFANLDDFQR
WFGKPVDKMIEAGDALADQETKATVSKLHQVLRPYLLRRLKADVEKQMPAKYEHIVYCRL
SKRQRFLYDDFMSRAQTKETLASGNFLSIINCLMQLRKVCNHPDLFEVRPVVTSWVLEKA
VATDFEPKDLLIRRKLRDRDAVDLQVLNLLPSHNDLNLSTHTVASTAHLNANAHLSNHIR
EIEKVVKTPVPENYYDFQSYYRYLKYKEQQDALDHSTHALYLNRLRCERRPIYGKNTLDL
LKVVNHTDKPLKMTDDRVLSEAFDDMFTTIEERSIKMKDIFEKYAFVTPPVVCLNMNDVA
INSGLNGYLRTVDNGISNPFHQLQTKLSIAFPDKSLLQYDCGKLQKLASLLLELKSNGHR
ALIFTQMTKVLDILEQFLNIQGYRYMRLDGATKIEDRQVLTERFNKDDRITCFILSTRSG
GLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILKKAN
QKRQLDNVIIQEGDFTTDYFGKLSYKDLLGEEVSNEDDSPLLISGVDENSKSFTKVLTQA
EDADDAAAANEAMKEVELDNEDFVEADPSRQESVSKSNTPQLEEDAVSIEPASSTLTMEE
DEYEEGHIDEYMIRYIASGMYWD
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgcctagaagtttagcaaggctgcgttccacagataacttgccaactcgcagctcctca
ccagatacggattctcctggtgcaaatggtggaaagataagggcaatatctgaggtacaa
tctgataacgaaagtgctgcgactaaaagaaggcgaactaggcttcggtcaagagattct
cccgttaattattcattaaaaagttataaaagggttagtgctcgccctaatgacgcacat
cctagttacctgaaggaatctgataaacctttagaatcagtattgaaacacattgaccag
aacttaccaaaggaacaagcagacaagttgcacaaggagaacttgtgcgatattttacaa
gcacaggaaaaaactttggatgagcttttcgtattgcaaaactttacatttttgactgat
tttgatcagatcaatagatcgagtgaaatttaccgtgcattgatagatgaaaataatctc
tggaacacattagcacccgagaacgtcaatggtcgtggtacaaaaagggtacattctcga
cgaagagctacaagcaatttatcagggcaagagagtaagctaatagaagaagttcaagac
atgctacttgaacgacggaggcgattgaaaactagtgctggaaaaacaaatggcatttct
caaactcacccaaagaaaacaaataagcatcaagtatttgagactagtatttcaaagaaa
gcagttgtttccagaccaacgtctgtgtcggagcacagaggaaagaaagcacgcaaacac
atggaagaaaaagttcacgcccaacaacaagagagcgatgaacaatcgggttctgatgac
acaatgcagcatggagaggatagtgaaacagttagttcactcagtgactctccagttgag
caatcatctttaggccatctaccaaaaaaggttcatttaaattttacaattcctaagcaa
atagtgacacatcctgatcacttaactaagccagaatatggtggcaatttagggaaccta
ctagcctctttttattccttagacgacgacatggagccttcccaatttcaagactatatc
agtctgcaaagggatttggtcgaacgaattcgcaaaggtgtcaatgacaagttcctcaaa
attgattacagcgagaatgttaataaacctcacgttcagggtacaactcgagaaccaaca
atgattaagctgaactcggtgcatcatagatacaaggaccctttcagaacacaacttttt
ccacatttgcattatgaccatcttctagctcatggagttttctactctaagttactacat
gataggagagtttctcgtattcaaaaggcaaaaaaagtcgctaatatgatcgatagtcat
ttcaagaaactctctcaatcaaaagaaagggaagagaaagaaaaccagattcgagtcata
aaattagctcgaagggtggccaaactggtaaagaatagatggctacaagcggagaaggtt
tttaggatattagaagacagagaaaaggagaaagagagaatcaaggagagcaaacaacat
ttgtctaagattttggaacactccacccaacttcttgaggcgcaaatgaaccgtgcaact
tcagcaagtgcttcagaattgccatcagcttcaggttcagatattggaagctctactaat
acagatgatgagaacatgagcacatctaacgatgaagaagaagaagatgcgaatgatgag
aaacatatgaaagtagactcctcacaagatgattcgaatcttactgttgaggagttaaga
gagaaatacaagcatttgagccatgtcaataacgaagaggagatcgttgaagaccaaaac
attgagctcactgctgaagaaaaaagactgttggacgaagaaacgaaaaaagtaaatcct
ttatttgacagtgacgatgaatctgagtctgaaatttccgaagattctgaggacatgagt
atggaatcgattactgacgaggatgatcaaaacggaggtactgatctcaatggttcttcg
gggctagcttcattatttggccaagttaaagaagaagaagattccgatgacgaatcggtt
aaaagtgatattgaagaatcggatcaggaagaaaaaatcaaagtagaaaagcacaatatt
ctgtcttccaactctgactctgttgttaccaaaaaatcaaaaagtgaagcatctgatgag
tttacgaacgagcaagtcaattcggttatcgatgttcccgttcctcatctcttacgtggt
actctcagagtataccagaaacagggtctcaattggttggcatccttgtacaataacaat
actaatggtattctcgcagatgaaatgggccttggtaaaacgatacagacaattgcactc
ttatcctatcttgcatgcgaaaagcatgtatggggacctcatttgattattgtccccact
tcagtgatgcttaattgggagatggagttcaagagatttgctccaggtttcaaagtcatg
acatattatggaaaccctcagcaaagaaaagaaaagagaagaggatggaacaaaccagat
tctttccacatgtgtatcacatcgtatcaacttgttatccaggatcactttgtgtttaga
agaaaaaagtggaaatatatgattcttgatgaagctcacaatattaaaaactttcgttcg
cagaggtggcaggcattattgaacttcaacacagaacatagacttttacttactggtact
ccattgcagaataacattatggagttgtggtctttgctgtactttttgatgccttcaagc
aaagctgacaacaaacaatccatgccagcaggatttgccaatctggatgattttcaaaga
tggtttggaaagccagtggacaaaatgatcgaagcaggagacgcattggctgatcaggag
acaaaagcaactgtttcaaaactgcatcaagttttgcgaccatacttactgagaaggctc
aaagcagatgttgaaaagcaaatgccagcaaagtatgaacacatagtttactgcagactt
tcaaagaggcaacgattcttgtatgatgatttcatgtcccgagctcagacaaaggagact
ttggcatcaggaaattttctctctatcattaactgtttgatgcaattacgaaaagtttgt
aatcatccagatctgtttgaggttcgcccagtggttacgtcctgggtcttggagaaagct
gtggctactgactttgagccaaaagatttgctcatcagaaggaaattacgagatcgggat
gcagttgatttgcaagtattgaatttactaccttcacataacgatttgaatctctcaact
cacacggtcgcttctacggcgcatttgaacgccaatgctcatctttcgaatcacattcgg
gaaatcgaaaaggtagtaaaaactcccgttccagagaactattatgatttccaaagttat
tacaggtatctcaagtacaaagaacaacaagatgctttggaccattcaactcacgcactg
tatttgaaccgactaagatgcgaaagacgtcctatttatggaaagaacactctagacctc
ttaaaagtggtcaatcacacagataaacccctcaaaatgacggatgacagggtcctgagc
gaggcctttgacgacatgtttactacaatagaagaacgatccataaagatgaaagacatt
tttgagaagtacgcttttgttactccaccagttgtttgcctcaatatgaatgatgttgct
attaattctggactgaatggctatctgcgtactgttgataatggaataagtaatcctttc
caccagctccagaccaagttgtcaattgcatttccagataaaagcttactacaatacgat
tgtggtaagctacaaaaattggcatctttgttactggaactaaaatcaaatggacatcgg
gctctgatattcactcagatgaccaaagtcttggatattttggaacaatttttgaacatt
caggggtatagatatatgcgacttgacggagctactaagattgaagacagacaggttctt
accgaaaggttcaataaggatgatagaataacctgtttcattttgtctacgcggtccgga
gggctggggattaatttgactggtgctgacactgttatcttctatgattcggattggaac
ccagcgatggataagcaatgccaagacaggtgtcatagaatcggtcagactagggacgtt
catatctacagattcgtttctgagtacactattgaatctaacattttgaaaaaagccaat
cagaaacggcaactcgacaacgtcattattcaagagggtgatttcactacagattacttt
ggtaaactctcctataaagacctgcttggtgaagaggtcagcaatgaagatgattcacct
ttactcatatcaggagtcgatgagaattcgaagagcttcacaaaagtactgacccaggct
gaagatgcagacgacgcagctgctgcaaatgaagccatgaaggaagttgaattagataac
gaagactttgtggaagctgatccttcgaggcaagaatcagtctcgaagtcgaatacacct
cagctagaggaagatgctgtcagtattgagccagcgtctagcacattgactatggaggaa
gacgaatacgaggaaggccatattgatgagtatatgataagatatatagcatccggcatg
tattgggactaa
DBGET
integrated database retrieval system
