Komagataella phaffii: PAS_chr4_0158
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Entry
PAS_chr4_0158 CDS
T01092
Name
(RefSeq) Tetradecameric mitochondrial chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ppa
Komagataella phaffii
Pathway
ppa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAS_chr4_0158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_chr4_0158
03110 Chaperones and folding catalysts [BR:
ppa03110
]
PAS_chr4_0158
03029 Mitochondrial biogenesis [BR:
ppa03029
]
PAS_chr4_0158
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppa04147
]
PAS_chr4_0158
Enzymes [BR:
ppa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PAS_chr4_0158
Messenger RNA biogenesis [BR:
ppa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PAS_chr4_0158
Chaperones and folding catalysts [BR:
ppa03110
]
Heat shock proteins
HSP60 / Chaperonin
PAS_chr4_0158
Mitochondrial biogenesis [BR:
ppa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PAS_chr4_0158
Exosome [BR:
ppa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PAS_chr4_0158
Exosomal proteins of other body fluids (saliva and urine)
PAS_chr4_0158
Exosomal proteins of breast cancer cells
PAS_chr4_0158
Exosomal proteins of colorectal cancer cells
PAS_chr4_0158
Exosomal proteins of bladder cancer cells
PAS_chr4_0158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
8201068
NCBI-ProteinID:
XP_002493562
UniProt:
C4R708
LinkDB
All DBs
Position
4:complement(310770..312485)
Genome browser
AA seq
571 aa
AA seq
DB search
MYRLACRPQLKKSAISLARTIAHKEIKFGVEGRAALLKGVETLADAVSVTLGPKGRNVLI
EQPFGGPKITKDGVTVAKAITLEDKFENLGAKLLQDVASKTNESAGDGTTSATVLGRTIF
TESVKNVAAGCNPMDLRRGSQAAVEAVVDFLQKNKKEITTSEEIAQVATISANGDSHIGE
LLASAMEKVGKEGVITVKEGKTLEDELEVTEGMRFDRGYISPYFITDAKSGKVEFENPLI
LLSEKKISSLQDVLPSLELSSKSRRPLLIVAEDIDGEALAACILNKLRGQVQVCAVKAPG
FGDNRKNILGDVAILTGGSVFTEELDLKPENASIELLGTAGSITITKEDTVVLNGEGSTD
AIQQRCEQIRGAVEDPSTGEYEREKLLERLAKLSGGVAVIRVGGASEVEVGEKKDRYDDA
LNATRAAVEEGILPGGGTALLKASRILDSVKGSNFDQQLGVEIIKKAIRGPAKRIVENAG
EEGAVVVGKILDDFGEDFNKGYDSSKGEYVNMLDAGIIDPFKVVRNGLVDASSVASLLAT
TECAIVDAPEPKGPPAGGPPAGGMGGMPGMF
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtatagattggcctgtcgtccacagctaaagaaatctgctatttctctagctcgtact
atcgctcacaaagaaatcaagttcggtgttgaaggccgggccgcacttttgaaaggtgtt
gagacattggctgatgctgtctcagttacacttggaccaaagggtcgtaatgttctaatt
gagcaaccttttggtggccctaagatcactaaggatggtgttaccgttgccaaggctatc
accctagaggacaagttcgaaaacttgggtgccaagctgttgcaggatgtcgcctccaag
accaatgagtctgccggtgatggtactacttcggctaccgttctggggcgtaccatcttc
actgagtccgtcaagaatgtggctgctggttgtaatccaatggaccttagacgtggttct
caggctgctgttgaggctgtagttgacttcttgcaaaagaacaagaaggagatcacaacc
tctgaagaaattgcccaggtggcaactatctctgccaacggagattctcacattggtgaa
ttattggcctctgccatggagaaggtcggtaaggagggtgttatcaccgttaaagagggt
aagactttggaggacgagctggaagtcactgaaggtatgcgtttcgatcgtggttacatc
tctccatactttattactgatgcaaagtcaggaaaggttgagtttgagaacccattgatc
ttgttgagtgagaagaagatctcttctttgcaggatgtcctcccttcattggaactatcc
tctaagtctcgccgtcctttactgatcgttgcggaagacattgacggtgaggcccttgca
gcctgtattttgaacaagcttcgtggtcaagtccaagtctgtgctgttaaggctcctggt
ttcggagacaacagaaagaacattctaggtgatgttgccattctcaccggtggatctgtt
ttcactgaagagctggacttgaagccagaaaatgccagcatcgaactattgggtactgct
ggatctatcaccatcaccaaggaagacactgttgtactcaacggtgagggttcaactgat
gctatccagcagagatgtgaacaaattcgtggtgctgtcgaagacccaagcaccggtgaa
tacgaaagagagaagctgcttgaacgtcttgctaaactttctggaggtgttgccgttatc
cgtgttggtggagcttccgaggttgaggttggtgagaagaaggaccgctacgacgatgct
ttgaacgctactcgtgctgctgttgaggaaggtatcttgccaggtggtggaactgctctt
ctgaaggcttcccgtatcctggacagtgtcaagggttctaactttgaccaacaactagga
gtcgaaatcatcaagaaggctatccgtggcccagctaagcgtattgttgagaatgctggt
gaagaaggtgctgtggtcgtcggcaagatcctggatgactttggagaagatttcaacaag
ggttacgactcttccaagggagaatacgtgaacatgttggatgctggtattattgatcct
ttcaaggtggttcgcaacggtctggttgacgcctccagtgtcgcttcactcttggccacc
accgaatgtgctatcgttgatgccccagaacctaagggaccaccagccggcggtcctcca
gctggcggcatgggcggtatgccgggtatgttctag
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