Komagataella phaffii: PAS_chr4_0163
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Entry
PAS_chr4_0163 CDS
T01092
Name
(RefSeq) Abundant subunit of the nuclear pore complex (NPC)
KO
K14312
nuclear pore complex protein Nup155
Organism
ppa
Komagataella phaffii
Pathway
ppa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PAS_chr4_0163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_chr4_0163
Messenger RNA biogenesis [BR:
ppa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PAS_chr4_0163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
8200954
NCBI-ProteinID:
XP_002493568
UniProt:
C4R714
LinkDB
All DBs
Position
4:complement(322193..326464)
Genome browser
AA seq
1423 aa
AA seq
DB search
MPDHFGQVLWSKKTTTANDDVKLERSELQKKAAVRRIVQNGIRKPTPLRMLKMPSYPQMN
GTDSKIDTSKENNDIKLTTSTPLKIGTNAIHSAISKDNNTVVLSDAISKYAIDNYNFQPP
LGLGPFSRFEKSSILNFPDRLFEEYNSTECITNMGIFQQIGKAWLTVDNKLIIFNFKSAT
QDYFTIDEIRHSILTVKLIEPKPNVFVDSVNYLLLVSTPIDIYIFAVEYNAIKDKLEIFN
TGMSVSTQGLIVDHFETFEKTHDIFFCGKGDSVNVWKLSYSNNEEWFHKKCNKECLTRNS
LSTVVPTFNKVPGLNIFGTSDSETSTSNERESISQMQIDQSRSILYTLSTRSVVRAYRIK
VLSSGTVSLSHPTTKGPMDLLKDLSTTYGLSNLTPQTKNFKLLKIFPVTNLESSSLFLIA
ITNTGSRIFINGSANLGDGLALIASHLKLPPPDHKFFQKVSDEKAKQGKDSSLAINSNES
SKLSENIYGNTASFLNVTALQLGQAQSVSELLTGLKNCEIISPNIFFGILRLKSENTDRL
FVSTPDYGVLKKNNSYVEDFEFLDSYGLIHDIIQLTPTFNATETPAGYYNQFASQYTKDP
LEVAVLTNTGIHIYRYRTPDLILEDSLNDNTFKAFAEKYGSREACSTTLYLSCRFGKSED
NKNKATQLFICGGQNASLNKNLTPVVDNVELSDRFYAVILLISRMFRDIWSKEIFKLVPE
INFDSNGFIEDGSVKKIEDRIILSGLTISRNTIEYLLSSLLIILDFLEKNKRSIPGALPP
TFNYENNFRDRDFEVCSQAEHIGFRAIFQLLNTMKEGLSFLLFLIEESESSKNGNFKDLV
RFMSVQDQADLSSLTFSQFIDNTEEQTQKLLKEILFSIINRNIVRGISVDLIIKNLQERC
GSFCSTSDVLIFKAFETLKRAKDISKRDPNLKVKHLQASVDLLKQANNLVSFDTIKEAVE
IMLEVNYYSGAIEFLLNMANASPNTTTSDAYSSDYYNTDKLLTNSSKEKDYEKRHMFYKY
VFDILVDIDTKAVESVQLINDTESRFQSEENQFITQNGDLITEFTQLRDTSYATCFAYQD
KLFHYEFYKWFIEQGVGERLLDIETPYILGFLQECAVKDLQMAKLLVAFHSKHENYYAAA
KILYDLANSDFTISLSDRVQYLSQANGFCNCVCPPSVRQEMIEMSTFIADLIAVSNIQEI
LLQTIISDERGTEESKSKAKEDLDGKILTISELFNDFINPLGYYELALIVFRISDHRNTD
DVLSQWELLLNKWHTDYIKNRPNESFYTVVSNLFVSVGRKLSDTETVFPVPDLFRLLAKF
INQSQPSESTPVGILVDIFLKSGVTYDKLYYTLKEMVESTTFEPFEGFTKFLKSEMIYLI
KNWYKTDRRLRDIVSSDQILSMTDYQVDTDPIYNYIRTTGIPI
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgccagatcatttcggccaggttctttggtccaagaaaacaacaacggccaatgatgat
gtgaagctggaaagatcggagttacagaaaaaggctgccgttaggagaattgtccaaaat
gggattcgtaaaccaactcctttaaggatgttaaaaatgccctcatatccccaaatgaac
ggcaccgattctaagatagatacgtcaaaagaaaataatgatatcaaacttacaacatcc
acccctttgaaaattggaacgaacgccatccattcggctatctctaaagataacaacaca
gtggtccttagtgatgccatatccaagtacgctatcgacaactataattttcagccacca
ttgggattgggtccattttcccgttttgaaaagtctagtatattgaattttcctgacaga
ttgtttgaagagtacaatagcactgaatgtatcaccaacatggggatatttcaacagatt
ggcaaggcctggcttaccgtagacaacaagttgatcatattcaacttcaagtctgctaca
caagactacttcacaattgatgaaattcgccacagtatcctgactgtaaaactcattgag
cctaaacctaatgtgttcgtggatagcgtcaattatttgttactggtatccactcctata
gatatctacattttcgcagttgagtataatgctatcaaggataaactggagattttcaac
actggaatgtcagtttctactcagggtctaatcgtcgatcattttgagacttttgagaag
acccacgatattttcttttgtggtaaaggtgacagtgtaaacgtttggaaactttcctat
tccaacaacgaagaatggtttcacaagaagtgcaataaagaatgtcttacaagaaacagc
ctttctactgttgtccccactttcaataaggtcccaggtttgaatatctttggaacttca
gattctgaaacctcaactagcaatgagagagaaagcatttcgcaaatgcagattgaccag
tctcgatccattttatacacattatccactcgatcagtcgttagagcatatcgcataaag
gttctgagctcgggtaccgtctccttgtctcatcctactactaaaggtccaatggattta
ttgaaggatctgagtactacctatggtttatcgaatctcaccccacagactaaaaacttc
aaactattgaaaatcttcccggtgacaaatcttgaaagtagctcattattcttgattgca
ataacaaatacaggttcacgtattttcattaatgggtcagctaatttgggagatggactt
gctttgattgctagtcatcttaaacttccccctcctgatcataagttcttccaaaaagta
tctgatgagaaggcaaagcaaggaaaagattcgtcgttggcaatcaattccaatgaatca
tccaagttatctgagaatatctatggcaacactgcctcgttcctgaatgtcactgctctt
caattaggacaagcccaatcagtatctgagttgttaacaggcttgaaaaactgtgagata
atttctccgaatatttttttcggtattctgagactcaaatctgaaaacactgaccggttg
tttgtatcgacccctgattacggggttttgaagaagaacaattcttatgttgaagatttt
gaatttctggacagttatggactgatccatgatatcattcaattaacacctacatttaat
gctactgaaactcctgctgggtattacaatcagtttgcttcccaatacacaaaagacccg
ttagaggttgctgttttaactaacacaggaattcacatctacagatacaggacaccagac
ttgatactagaagacagcttaaatgataacacatttaaagcttttgctgaaaagtatggg
tcccgagaagcatgttctaccactctatacctctcttgtcgatttggtaagtctgaggac
aacaaaaataaagcgacccagcttttcatttgtggtggacaaaatgcctcgctgaacaaa
aacctaacccccgtggttgataatgtggaactcagcgataggttttatgctgtgattctc
ttgatctcgagaatgtttagagatatttggtctaaagaaatattcaaattagtaccggaa
attaattttgattcgaacggctttattgaagatggatctgtcaaaaaaattgaagatcgt
attatcctttccggattaacaatatccagaaatactattgagtatttactgtcctcattg
ttaattattcttgattttttagaaaagaacaagagatctattccaggcgccttaccacca
actttcaattatgagaataatttccgtgacagagactttgaagtttgcagccaagccgag
catataggctttagagcgattttccagttactaaacactatgaaagaaggtttgtcgttt
ctgcttttcttgatcgaagaaagtgagtcctcaaaaaatggcaatttcaaagacttggtc
agattcatgtcagtacaggatcaggctgatctaagctctttgacatttagccagttcata
gacaataccgaggagcaaactcaaaaattgttgaaagaaattttgttctctatcatcaac
agaaacattgtccgcggaatctcggtggacctcataatcaagaacctccaagagagatgt
ggttcattttgctcaactagtgacgttctaatcttcaaagcctttgagaccttgaaacgt
gccaaagacataagcaagagagatccgaatcttaaggtaaaacatcttcaggcctctgtg
gacctgctgaagcaggctaacaacttggtcagttttgatactatcaaggaagctgtggag
atcatgttggaagtcaactattatagtggagcaatagagttcctattaaatatggccaat
gcttctcccaacaccacgacatcggacgcttacagctcagattactacaataccgataag
ttgctaacaaattcttccaaggagaaagattatgagaagagacacatgttctacaagtat
gtcttcgacattctggttgatattgatactaaggctgtagagagtgtccagcttatcaat
gatactgaaagcagattccaaagcgaagaaaaccagttcattactcaaaatggagactta
attactgagtttactcagctaagggatacaagttatgcgacctgtttcgcttatcaggac
aaattgtttcactatgagttttataagtggtttatcgaacaaggtgttggtgagagattg
ctagatattgagactccctacattttgggctttcttcaggaatgtgccgtcaaagatctt
caaatggccaagttattggttgctttccattccaaacatgagaactactacgcagcggcc
aaaatcttatatgacttggctaatagcgatttcaccatcagcttatctgatcgcgtgcaa
tatctctctcaagctaacggtttctgcaactgcgtctgtcctccaagtgtaagacaggag
atgattgaaatgtcaactttcattgccgatttgattgcagtatccaatatacaagaaatc
cttttgcaaactataatttctgacgagagaggaactgaagaatcaaaaagtaaagccaag
gaagacctggatggtaaaatcctgacgatcagtgagcttttcaatgatttcatcaaccct
ctgggttattatgaactggctctgatagtgttccgtatttcagaccatagaaacacagac
gatgtcttatcccaatgggaattactactaaacaagtggcacactgattatattaaaaat
agaccgaacgagtcgttctacacagttgtgtccaatctttttgtctcggtcggtcgaaag
ctcagtgatactgaaactgtttttccggtgccggacttgtttcgtctgttagccaaattc
atcaatcagtcacaaccctcagagagtacaccggtcggaatactagttgatatatttctg
aagtcgggcgtgacttacgataaattgtactacacgctaaaggaaatggtcgaaagcacc
acctttgaaccttttgaaggattcacaaagttcctgaaatctgaaatgatttatttgatt
aagaattggtacaaaacggatagaaggttgcgtgacattgtctcatctgatcagatattg
agcatgacagattatcaagtcgataccgatcctatctacaattacattcgtaccaccggt
attcccatttag
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