Komagataella phaffii: PAS_chr4_0195
Help
Entry
PAS_chr4_0195 CDS
T01092
Name
(RefSeq) Essential serine kinase involved in the processing of the 20S pre-rRNA into mature 18S rRNA
KO
K07179
RIO kinase 2 [EC:
2.7.11.1
]
Organism
ppa
Komagataella phaffii
Pathway
ppa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PAS_chr4_0195
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ppa01001
]
PAS_chr4_0195
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppa03009
]
PAS_chr4_0195
Enzymes [BR:
ppa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
PAS_chr4_0195
Protein kinases [BR:
ppa01001
]
Serine/threonine kinases: Other
RIO family [OT]
PAS_chr4_0195
Ribosome biogenesis [BR:
ppa03009
]
Eukaryotic type
Pre-40S particles
Kinases
PAS_chr4_0195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
Rio2_N
APH
ABC1
Motif
Other DBs
NCBI-GeneID:
8201102
NCBI-ProteinID:
XP_002493599
UniProt:
C4R745
LinkDB
All DBs
Position
4:400432..401670
Genome browser
AA seq
412 aa
AA seq
DB search
MKLDISHMRYLTNDDFRVLIAVELGSRNHEVVPTPMIHQIGGLRSPSTTNRSISDLAKLS
LISKLRNAKYDGYRLSYLGFDYLALKSMLKKGSLYSMGSPIGVGKESDIYLVSDPKGVEK
VLKVHRLGRTSFKTVKRNRDYLKNRQSCNWMYLSRLAAEKEYMFMSILYSNGFSVPEPFD
SSRHCIIMEWIRGVTMRRLRTHKDYKKLYSELMRFAVNLANHGLIHCDFNEFNVIIRDDP
KPDEPGFVVIDFPQCISIEHPDASFYFKRDIECIRKFFRKVFNYGPTSDTSMMDEDGFGE
GFKYAYPVFERDVKRINNLDVLVEASGFKKNKKNSDLETAVQGMREYTYEEEEGEGSTEE
ESDYEDSLEFDDSKSEGEQSDLAEENERIVQALTSGVENLKMDKLGNYILDD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgatatatcacacatgaggtacctcaccaatgacgacttccgagttttaata
gctgtggaattgggatctcgtaatcatgaggtggtcccaacaccaatgatccatcaaatc
ggagggcttcgttctccgtctactactaacagatccatctctgatttggccaaactaagc
ttgatttcaaagcttcgaaatgccaagtatgatggttacaggctgagttatttaggattt
gattatctggcgctgaagagcatgctgaagaaaggttccttgtactctatgggttcccca
atcggtgttggtaaggagtctgatatttatctggttagtgaccctaaaggagtggaaaag
gttttgaaagttcacagactgggtaggacttcattcaaaacagtaaagagaaacagagat
tatttaaagaatcggcagtcatgtaactggatgtatctttccagactagccgctgaaaag
gagtacatgttcatgagcatcttatactccaatggattttcagtccccgagccttttgat
agttccaggcattgcataataatggagtggattaggggtgttacaatgagaaggctgaga
actcataaagattacaagaagttgtactctgaactgatgagatttgccgtgaaccttgcc
aaccacggattaattcactgtgatttcaacgagttcaatgtcattattagagatgatccg
aaacccgatgagcctgggtttgtggtcatagattttcctcaatgtatttccattgaacac
cccgatgcttctttctacttcaagagggatatcgaatgtataaggaagttttttagaaag
gtattcaattacggtccaacttctgacacttcaatgatggacgaggatggctttggtgaa
ggttttaaatatgcttacccagtatttgagagggatgtcaaacgtatcaacaacttggat
gtgctagtggaagcttctggtttcaagaagaataagaaaaattctgacctcgagacagca
gttcaaggaatgcgagagtacacctatgaagaggaagaaggtgaaggctcaactgaagaa
gaatctgactacgaagatagccttgaatttgatgattctaaatcagaaggcgaacaatct
gaccttgctgaggaaaatgaacgaattgtccaagccctcacatctggtgttgaaaaccta
aagatggataaacttggtaattacatattggatgattag
DBGET
integrated database retrieval system
