Komagataella phaffii: PAS_chr4_0239
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Entry
PAS_chr4_0239 CDS
T01092
Name
(RefSeq) Second-largest subunit of RNA polymerase III
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
ppa
Komagataella phaffii
Pathway
ppa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PAS_chr4_0239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppa03021
]
PAS_chr4_0239
Enzymes [BR:
ppa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PAS_chr4_0239
Transcription machinery [BR:
ppa03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
PAS_chr4_0239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
RemA-like
Motif
Other DBs
NCBI-GeneID:
8200908
NCBI-ProteinID:
XP_002493647
UniProt:
C4R793
LinkDB
All DBs
Position
4:482791..486267
Genome browser
AA seq
1158 aa
AA seq
DB search
MPPRKKPLNKPVKTEEADDAFGELLKPIYKGKALADPINTAEDKWNLLPAFLQVKGLVKQ
HLDSFNYFVDKDLKKIIKANEKVLSDVDPEFYLKYLDIRVGYKSTEDLQKVKRNMIPPHQ
CRLSDTTYSAPIYVDVEYTRGRKIIMHRDLEIGKMPIMLRSNKCILESKDESQMASLCEC
PLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADDKKQIVQASVTSSTHERKSKTYVVTKN
NKIYLKHNSISEEVPIVLVLKAAGIVSDLEIMQLVCGDDSTYQDLFTINFEEAAKLDIHT
QRDALEYIGKRVKTMRRLGAPKLSIYQEGVEAIANTIVAHISVEDLNFREKAIYLAIMTR
RVVMAMHNPTMIDDRDYVGNKRLELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPNRAS
EFDALLSINVHSNNITTGINRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRIS
SQFEKSRKVSGPRALQPSQFGMLCTSDTPEGEACGLVKNLALMTHITTDDEEEPVRKICY
LLGAEDIKIVDSSVISSRSNFGVYLNGTMIGVIRYPTVFVTKFRKLRRSGKVSAFISIYI
NSHHKAVHLAADGGRICRPLIIVENGVSKVEAHHLQKLKDGEWQFDSFLTNGLVEYLDVN
EENDSLIALYEKDIKNYTTHLEIEPFTVLGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGA
IGYNQFNRIDTLLYLMVYPQQPMVKTKTIELIGYDKLPAGQNATVAVMSYSGYDIEDALV
LNKASIDRGFGRCQVFRKNTTLLKRYPNHTKDILGGMSVNDQGEPIFQHRSLGPDGLGEV
GLPLESGQVYVNKFVPINSEESIIGQTPDDSQRKEQHRETPMVYRGPEPSYIDQMMMSLG
ENDQVLVKALLRQTRRPELGDKFSSRHGQKGVCGIIVQQEDLPFNDDGISPDIIMNPHGF
PSRMTVGKMIELISGKAGVLDGSLQYGTCFGGSDLKEMSQILIDKGFSYSGKDQLYSGIT
GECLQAYIFFGPIYYQKLKHMVLDKMHARSRGPRAVLTRQPTEGRSRDGGLRLGEMERDC
VVAYGASQLLLERLMISSDAFEVDVCNTCGLMGYNGWCPTCKSSEFIIKMTIPYAAKLLF
QELVSMNIAPRLELGDVF
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctcggaagaaacccttgaataagccagttaaaacggaagaagctgatgacgct
tttggtgaacttttgaaacctatttacaaaggaaaagccctagctgatccaataaacacg
gcagaagataagtggaaccttttaccagctttccttcaagttaaaggactggttaaacag
catctagactctttcaactactttgtggataaagatttgaaaaagattatcaaagctaac
gaaaaggtgctcagtgatgtggatccggagttctatctgaaatacttggacatcagggtt
ggatataagtctacagaagacttacagaaagtcaagcggaacatgattccgccccaccaa
tgtagattgagtgataccacctatagtgctccaatctacgtggatgttgagtatacccgg
gggagaaaaattattatgcatagagatcttgaaattggtaaaatgcctattatgttgcgc
tccaacaaatgtatattggaaagcaaggatgaatctcaaatggcttcgttgtgtgaatgt
ccattagaccctggtggatattttattgtgaatggtaccgagaaggtaattttggtgcag
gagcagttaagtaaaaacagaatcattgtagaagctgatgataagaaacaaatcgtgcaa
gcttcagtgacttcttcgacacatgaaagaaaatctaaaacatacgttgttaccaaaaat
aacaagatttatctcaaacacaattccatctccgaggaagttcctattgtgctagtgctg
aaagctgctggaatcgtgtctgatttggaaatcatgcaactagtttgtggcgatgattca
acgtatcaggaccttttcactatcaatttcgaagaagctgcaaaactcgatattcatact
caaagggatgctctagagtatattggtaaacgagttaagaccatgagaagactaggtgct
ccaaaattatctatctatcaagaaggtgtcgaagcgattgcaaataccattgttgcacat
atctctgtcgaagatcttaacttcagagaaaaggctatataccttgccatcatgactaga
agagtggttatggcgatgcataaccccacaatgatagacgatagggactacgtgggtaac
aaaagattagagttggccggtcagttaatgtcgcttctattcgaagatttgtttaagaaa
ttcaactcagatttcaaggccaatattgacaaaattctcaagaaacctaacagagcctca
gaatttgatgctttactaagtatcaatgttcactccaacaacattaccacaggtattaat
cgtgccatttcaacaggaaactggtcactaaaacgtttcaagatggaacgggcaggtgtc
actcatgtattatctaggctgtcctatatcagtgctttgggtatgatgactcgtatctca
tcccaatttgagaaatctagaaaagtttcgggtccaagagctttgcagccttcccaattt
ggtatgctttgtacttctgatactccggaaggtgaagcttgtggtttagttaagaatttg
gccttaatgacccacattaccactgatgacgaggaggagccagttagaaaaatttgctat
ctgttaggagctgaagacattaagattgtggattccagtgtaattagttctcgaagcaac
tttggtgtctacttgaacggtactatgataggggtcatccgatatccaactgtgtttgtt
accaaattcaggaagttgaggcggtcaggaaaagtttccgctttcatatccatctacatt
aactcgcatcataaagctgttcatcttgcagctgatggaggtcgtatttgtcgtcctttg
atcatcgtagagaatggagtttccaaagttgaggcacatcatttacaaaaactgaaagat
ggagaatggcagtttgattcttttttaacgaatggtctagtggaataccttgatgtcaac
gaggaaaatgactccttgattgctctgtatgaaaaggatatcaaaaattacaccacccac
ttggagattgaacctttcacagttcttggtgcagtagctggtttaattccttaccctcac
cataatcaatctccaagaaatacatatcaatgtgcgatgggtaagcaggctattggagct
attggttataaccaattcaacagaatagatactctgttgtatcttatggtatatccccaa
caaccaatggttaaaacaaagaccattgaattaatcggctacgacaaactgcctgctgga
caaaatgctactgttgcagtgatgtcgtattcaggatatgatattgaggatgccttggtc
ttgaacaaagccagtattgatagaggtttcggaagatgtcaagttttccgtaagaatact
acattgctgaagcgatatccaaaccatacaaaggatattctgggtggtatgtccgtcaat
gatcaaggagagcccatttttcaacaccgttcattaggacctgacggtttaggagaagtt
ggtttgccattagaaagtgggcaggtttacgtgaacaaatttgtccctataaattcagaa
gaatccatcattggccaaactccagatgattctcagagaaaggaacaacacagagagacg
ccaatggtttatcgtggacctgaaccaagttatattgaccaaatgatgatgtcacttgga
gagaatgatcaggttctcgttaaggctttacttagacagactcgccgacccgaattaggt
gacaagttttcttccagacatggacagaaaggtgtttgtggtatcattgtacagcaagaa
gatttgccattcaatgatgatggaatatctcccgatatcattatgaatcctcacggtttc
ccttctcgtatgactgtgggtaaaatgattgaacttataagtggaaaagccggtgtttta
gacggatctttacaatatggtacttgtttcggggggtctgatttgaaggagatgtctcaa
atattgattgataaaggattcagttacagcggaaaagaccaactttattctggtattact
ggcgagtgtctgcaagcttacattttctttggtcccatttactatcagaaactgaagcat
atggttttggataagatgcatgctaggtcgagaggtcctcgggctgtattaacccgtcaa
ccaactgaaggtaggtcaagagatggtggtcttagattaggtgaaatggagagagactgt
gtggttgcttatggggcttcccagctgttactagagagactaatgatcagctccgatgct
tttgaagtagatgtctgcaatacttgtggtttgatggggtacaatggctggtgcccaact
tgtaaatccagtgaatttatcatcaaaatgacaattccttacgctgctaaattgttgttc
caggaattagtaagtatgaacatagctccacgtttagaacttggggatgtcttttga
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integrated database retrieval system
