Komagataella phaffii: PAS_chr4_0415
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Entry
PAS_chr4_0415 CDS
T01092
Name
(RefSeq) Cytosolic serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppa
Komagataella phaffii
Pathway
ppa00260
Glycine, serine and threonine metabolism
ppa00460
Cyanoamino acid metabolism
ppa00630
Glyoxylate and dicarboxylate metabolism
ppa00670
One carbon pool by folate
ppa00680
Methane metabolism
ppa01100
Metabolic pathways
ppa01110
Biosynthesis of secondary metabolites
ppa01200
Carbon metabolism
ppa01230
Biosynthesis of amino acids
ppa01240
Biosynthesis of cofactors
ppa04981
Folate transport and metabolism
Module
ppa_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PAS_chr4_0415
09102 Energy metabolism
00680 Methane metabolism
PAS_chr4_0415
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PAS_chr4_0415
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PAS_chr4_0415
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PAS_chr4_0415
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PAS_chr4_0415
Enzymes [BR:
ppa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PAS_chr4_0415
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
8200698
NCBI-ProteinID:
XP_002493843
UniProt:
C4R7T9
LinkDB
All DBs
Position
4:818192..819604
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AA seq
470 aa
AA seq
DB search
MSHYALSPEHKQMVEGHLAETDPEVNQIIKDEVDRQKHSIVLIASENFTSTSVFDALGTP
MCNKYSEGYPGARYYGGNEHIDRMEILCQQRALKAFHLDGSRWGVNVQTLSGSPANLQVY
QAIMKPHDRLMGLDLPHGGHLSHGYQTDTRKISAVSTYFETMPYRVDLETGIIDYDMLEK
TAVLYRPKVLVAGTSAYCRLIDYKRMREIADKVGAYLVVDMAHISGLIAAGVIPSPFEYA
DIVTTTTHKSLRGPRGAMIFFRKGVRSVNPKTGKEIYYDLENPINFSVFPGHQGGPHNHT
IAALATALKQAATPEFKQYQEQVLKNAKALENEFKRLGYKLVSDGTDSHMVLVSLKDKDI
DGARIETVCENINIALNKNSIPGDRSALVPGGVRIGAPAMTTRGASEEDFVKIANYIDKS
VQYAKKVQSELPIEANKLKDFKAKIAEGSDEITQLKNEISAWAGEFPLSV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcacactacgctttgagccctgagcacaagcaaatggttgagggccatttggctgaa
accgatcccgaagttaaccaaatcatcaaagatgaggtcgacagacagaagcactccatt
gttttaatcgcttctgagaacttcacttccacttcggtgttcgatgctctcggaacccct
atgtgtaacaagtactctgaaggttacccaggggcaagatactacggtggtaatgagcac
attgaccgtatggaaattctgtgtcaacagagagctcttaaggctttccacttggatgga
agtcgctggggagttaacgttcaaactttgtctggttctccagccaacttgcaggtatac
caagctatcatgaagcctcatgacagacttatgggtttggacttgccccacggaggtcac
ttgtctcatggttatcagactgataccagaaaaatctctgcagtctcgacttactttgaa
acaatgccttacagagtcgatctggaaactggcattatcgactacgacatgcttgagaag
actgcagttctataccgtccaaaggtcctggttgccggtacctctgcatactgtagattg
atcgattacaagagaatgagggagattgctgacaaagttggtgcatacttagtcgttgat
atggctcacatttctggtttgattgccgcaggtgtcattccatctcctttcgaatacgcc
gacattgtaaccacaaccacccacaagtctttgagaggcccacgtggtgcaatgattttc
ttccgtaagggtgtccgttctgtcaacccaaagactggtaaggaaatctactacgacctt
gaaaaccccatcaatttctccgttttccctggccaccaaggtggtccacacaaccacaca
atcgccgctttagctaccgctttgaagcaagctgctacacctgagttcaagcagtatcag
gaacaggttttgaagaatgctaaggctctggagaatgagtttaagagacttggatacaag
ttggtttctgacggaactgactcccatatggtccttgtttcattgaaggataaggatatt
gatggtgccagaattgaaaccgtttgtgagaacatcaatatcgctttgaataagaactcc
attccaggtgacagatccgctttggtcccaggtggtgttcgtatcggtgctcctgctatg
accaccagaggtgcttctgaggaagacttcgtcaagatcgctaactacatcgacaaatct
gttcaatatgctaagaaagtccaaagcgagttaccaattgaagccaacaagcttaaagat
ttcaaggccaagatcgctgaaggctctgacgagatcactcaactcaagaatgagattagc
gcctgggcaggagaattcccattgtctgtttag
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