Komagataella phaffii: PAS_chr4_0419
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Entry
PAS_chr4_0419 CDS
T01092
Name
(RefSeq) Putative ATPase of the AAA family
KO
K14571
ribosome biogenesis ATPase
Organism
ppa
Komagataella phaffii
Pathway
ppa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PAS_chr4_0419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppa03009
]
PAS_chr4_0419
Ribosome biogenesis [BR:
ppa03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
PAS_chr4_0419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_33
AAA_14
AAA_5
AAA_22
TIP49
AAA_2
ABC_tran
RNA_helicase
AAA_17
AAA_28
nSTAND3
Rad17
Vps4_C
NPHP3_N
Mg_chelatase
AAA_18
NB-ARC
AAA_3
Zeta_toxin
SKI
AAA_7
NACHT
TsaE
ATPase
Sigma54_activat
Viral_helicase1
IstB_IS21
Parvo_NS1
AAA_19
DUF5906
Cytidylate_kin
DUF815
Cytidylate_kin2
CPT
Phage_Gp17
Sublancin
AAA_23
AAA_11
Motif
Other DBs
NCBI-GeneID:
8200702
NCBI-ProteinID:
XP_002493847
UniProt:
C4R7U3
LinkDB
All DBs
Position
4:complement(823173..825629)
Genome browser
AA seq
818 aa
AA seq
DB search
MAKSRPIVISKDLEDKITNAISKLLDEKTERLKIKNAKNGQEEASTFPVLARDLKASEIL
LYAQGSDFSLKRTKKFILEKAIEKVWKEIKLEESEELKGLGLDEEIDKETFLAEKNLMEV
VDTNSMNRSIVGLWGSGPKEDEKDEKDKSEEKSDENDANTETSDKKEKKRKGKDSEKPNK
RIKSKDRTPPSLTLSQLGGLDDIITELMEVVGMPILHPEIYLATGIHPPRGVLLHGPPGC
GKTTIANALAGELQVPFISLSAPSVVSGMSGESEKKIRGIFEEAKELAPCLIFFDEIDAI
TPKRDGGAQREMERRIVAQLLTSMDELSLDKTDGKPVIIIGATNRPDSLDPALRRAGRFD
REICINVPNELARYNIMESMMKTIKASGDLQLMKLAKMTPGYVGADLKALVSAAGISAIK
RIFSTLSQEQEKKFIEAMYEEEKQDEDTMDIDEGITDKTRELTHLSTIQKFLLKHPHPLT
EEQLAPLSITYEDFITALPTIQPTAKREGFATVPDVTWKSVGALSKTRVELHMAIVQPIK
RPEIYEKVGITAPAGVLMWGPPGCGKTLLAKAVANESKANFISIKGPELLNKYVGESEKA
IRQVFSRARASIPCVIFFDELDALVPRRDASLSESSSRVVNTLLTELDGLNDRKGIFVIG
ATNRPDMIDPAMLRPGRLDKTLYIELPTADERLEIMKTVIRVNGTPISSDVNLESIAHDE
RCRNFSGADLSSLVREAGVISLKRRFFTEINQGVEDICISDSEQIMVTPSDFETALDSVN
PSVSDRDRQKYERLNRRLGWSKTTGGPHGDNKDAEEDN
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatccagacccattgtgatatcaaaggacttggaggataagatcactaatgcg
atatccaaactgctggacgaaaagacagaacgtctgaagatcaagaatgctaagaacggc
caagaggaggcaagtactttcccagtattagctagagacctaaaggcatcggaaatttta
ctgtatgcccaaggatctgatttctccttgaagaggaccaagaaattcattttagaaaag
gccatagagaaagtttggaaggagatcaaactggaagagtccgaagagttgaagggtcta
ggactcgatgaagaaatcgacaaggagacatttctggccgaaaagaacctgatggaggtc
gtagacacaaattcgatgaacagaagtattgttggtctctggggatctgggcctaaagag
gatgagaaagacgaaaaagacaaatctgaggagaaatctgacgaaaacgatgccaatact
gagacttctgataagaaagagaaaaagaggaaaggaaaagactctgaaaagcctaacaag
agaatcaaaagtaaagacagaacaccgccttcccttacgctatcacaactcggtggatta
gacgatatcattactgaactaatggaagtggttggtatgccaattcttcatcctgaaatc
tacctcgctacaggtatacaccctcctagaggtgtactcttacatggcccaccaggctgt
gggaagacgactattgctaatgcccttgctggtgagcttcaagtgccctttatttcactg
agcgccccttctgtggtaagtggtatgtctggtgagagcgagaaaaagatcagaggaatc
tttgaagaggctaaagaattagccccttgtttgatattctttgatgaaattgatgctatt
acgccaaagagagatggcggagcccaaagagaaatggaaagaaggatcgtagcccaactg
ttgacttctatggacgagttatcactggataagacagatggtaagccggtaatcataata
ggagccactaataggccagactcgttggatcctgcactgagaagggcaggaagattcgat
agagagatctgtatcaatgttcccaatgagttagctcgttataacatcatggaatcaatg
atgaaaactatcaaagcaagcggggatcttcaattaatgaaacttgcaaagatgactcca
ggatatgttggtgcggatctcaaagcacttgttagcgcagctggaatttccgctattaaa
aggatcttcagcacgttgagtcaagaacaggaaaagaaattcatagaagctatgtacgag
gaagaaaagcaagatgaggacaccatggacatagacgagggaatcacagacaaaaccaga
gaattaactcacctctcgactattcaaaagtttctacttaagcatcctcatcctctgacg
gaggaacagttggctccattgtcaatcacttatgaagatttcattactgcattacccact
attcaaccaaccgccaaacgagagggatttgctacggtgcctgatgtcacttggaaaagt
gtaggtgctctatccaagaccagggtagaattacatatggctattgttcagcctattaaa
agacctgaaatttatgagaaagttggtatcactgcccctgctggtgttttaatgtgggga
cctcctggttgtggtaaaacccttttagccaaagcagttgccaatgagtcaaaggcaaat
ttcatttctataaaaggaccagaattattgaataaatatgttggtgaatcagagaaggct
atcagacaagttttctctcgtgcaagggcatcaattccatgtgtgattttttttgatgaa
ttagatgctttggtcccacgtagagatgcctcattatcagagtcgagctcaagagtggtg
aatacactgttaaccgaactggacggattgaatgaccgtaagggcatctttgtgatcgga
gctaccaacagacctgatatgattgatcctgcaatgctccgtccaggtaggttggataaa
accttatacatcgagctacctacggctgatgaacgattagaaataatgaagactgtgatc
agggtgaatggaactccaatttcctcagatgtcaaccttgaatcaattgcacacgacgaa
agatgtcgtaatttttcaggagccgatttgtcttcgttggttagggaagctggtgttatt
tcattgaaaagacggtttttcactgagattaaccaaggagtcgaagatatctgcatatca
gactcggaacaaatcatggttacaccatcagattttgaaactgcactggatagtgtcaac
ccaagtgtgagtgaccgagatagacaaaagtacgaaaggttgaaccgtcgattgggctgg
agtaagacgacaggtggaccacacggagataacaaggacgccgaagaggacaactaa
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