Komagataella phaffii: PAS_chr4_0421
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Entry
PAS_chr4_0421 CDS
T01092
Name
(RefSeq) Protein of unknown function, required for cell growth and possibly involved in rRNA processing
KO
K06947
polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppa03009
]
PAS_chr4_0421
Ribosome biogenesis [BR:
ppa03009
]
Eukaryotic type
Pre-60S particles
Kinases
PAS_chr4_0421
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
FtsK_SpoIIIE
MMR_HSR1
ATP_bind_1
CbiA
DUF463
ATP-synt_ab
Cupin_NOL9
MeaB
AAA_14
AAA_29
Dynamin_N
G-alpha
AAA_22
RNA_helicase
AAA_25
MobB
Arf
Motif
Other DBs
NCBI-GeneID:
8200704
NCBI-ProteinID:
XP_002493849
UniProt:
C4R7U5
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Position
4:complement(join(826624..828494,828565..828577))
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AA seq
627 aa
AA seq
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MGSKSSAFAALNHPTPTSRDDTPDLELNDSADPREEEITNGLSEESDTLNQFQIQEFLET
SALEPLDTSNFTVTEENVVFGETYVRFSLKEEEYLLLGGQYELSVQKGAVIVNGISMNSG
SNPVNVVAPMFKALPVIKSVHSDDASSVLSQSFQSVILVRDYSTGLQNVGELLPPLRNIF
SFVSSDSKKSLSPYEAKFYGHTFTPILPPQKSRTSGTLISDQWKLAMNTVTKGSRILVIG
TKNSGKSTFVTNLINQLLQSTTVNVMDIDPGQPEFSSQDCISLSEVDSPIFGMNMHQCKL
LVEHYTGFSSPSRQPTRYISAMKALTNYYWCHLHKKNLPLLINTPGWIKGFGIELLKDMC
SFIKPTQVIFLTYPDSDEENELMNSLRTELFLKITGVHNYNTAKSLPSHLRSLRILQYFH
QISPLPRYNFTPLLHKAPYRVSFSDNALIDGVAISFVTILDAYELHHDDIPGALDGCVVA
VYSVPATKVEDLFSSGNVSITKGLPNYVSDSVFSTAFDDLYDLEGCHFFGHALIHSVDLV
RKVFNVYMPKNSTPARSSDQTLILIRGRTEIPIGEIAPKLICDQTDVARRNGKIIAAPYV
TFHKRMGKGSKELRFRRNILRNSHGAK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcaaatcgagtgcgtttgcagctctgaatcaccctacacccacatctcgggac
gatactccagatttagagttgaatgattcagcagaccccagagaggaagagattaccaac
ggcttgtccgaggaatccgatacgttgaatcagtttcagatacaagaatttttggagaca
tctgctcttgaacctttggatacttccaacttcacagttactgaagaaaatgttgtgttt
ggcgagacttatgtgcgattctccttgaaagaagaggagtatcttttgcttggaggtcaa
tacgaactatctgtgcaaaaaggagctgtaatagtgaacgggatttcaatgaattcagga
tctaatccagtaaatgttgttgctccaatgtttaaggctctcccagtaataaaatctgtc
cattcagatgatgcctcaagtgtgctctcacagagctttcaatcagtgatattagtaagg
gattactcaacaggtctccaaaatgtgggagaattgctaccaccactaagaaatatcttc
tccttcgtttcttcggattccaagaagtcactgtctccatacgaggcaaaattctatggg
cacacattcactcccatcttaccaccccaaaaatctcgtacatcgggaacacttatatct
gaccagtggaaattggctatgaacacagtgacaaaaggatctagaatcttggttattgga
accaaaaacagcgggaaatcaactttcgtgacaaatttaatcaatcagttactacaatca
accacagtgaacgtgatggacattgaccctggacaaccagagttctcttcccaagattgc
ataagtttgtcagaggttgactctcctatctttggtatgaacatgcaccagtgtaagctt
ttagttgagcattatacgggattttcatctcccagtaggcaacccacaagatacatctca
gctatgaaagcattaacaaactactattggtgtcacttacacaagaagaacttaccatta
ttaataaatacacctggctggataaaagggtttgggattgagttactaaaagacatgtgt
agctttatcaaacccactcaggtaatcttcttaacataccctgattcagacgaagagaat
gagctgatgaacagtttgcgaacagaattgtttttaaagataactggcgtccataactat
aatactgccaaatctttaccctcccatttgagaagtttacgaattcttcaatacttccac
caaatttccccactaccaagatataattttacacccctattgcataaagctccgtaccga
gtttccttttctgataatgctctaattgacggtgtggccatcagttttgttacaattcta
gatgcctatgaattgcatcatgatgatatccctggagcattggacggctgcgtcgtagcc
gtgtactcagtcccagcaacgaaagtggaagatcttttctcctcaggaaacgtatccatt
actaaaggtttacctaattatgtctctgattctgttttctcaacagcatttgatgatctt
tacgatttggagggctgtcatttctttggtcatgccctcattcactccgttgaccttgtt
cggaaggtattcaatgtctatatgcccaaaaattcgacccctgcccggtcatcggaccaa
acgttgatcttgataagaggaagaaccgaaatacctataggagaaatagcacccaagctg
atatgtgaccagacagatgttgctagaaggaatggaaaaattattgccgcaccatacgta
acctttcataaaagaatgggtaagggatccaaagaactcaggttccggagaaatattctg
aggaacagccatggtgccaagtag
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