Komagataella phaffii: PAS_chr4_0423
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Entry
PAS_chr4_0423 CDS
T01092
Name
(RefSeq) Putative GTPase that associates with pre-60S ribosomal subunits in the nucleolus
KO
K14537
nuclear GTP-binding protein
Organism
ppa
Komagataella phaffii
Pathway
ppa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PAS_chr4_0423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppa03009
]
PAS_chr4_0423
Ribosome biogenesis [BR:
ppa03009
]
Eukaryotic type
Pre-60S particles
GTPases
PAS_chr4_0423
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NGP1NT
MMR_HSR1
FeoB_N
Arf
RsgA_GTPase
GTP_EFTU
Motif
Other DBs
NCBI-GeneID:
8200992
NCBI-ProteinID:
XP_002493853
UniProt:
C4R7U9
LinkDB
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Position
4:complement(join(831653..832405,832798..833604))
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AA seq
519 aa
AA seq
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MGTAKKEKQRRVKENDLRDGNLRVKGENFYRDAKKVKHLNMYKQGRAVRNAKGDIIKAAY
LQDTKVPTARVDPNRRWFGNTRVISQDALTHFRDALGEKQHDSYQVLLKRNKLPMSLLEE
KDDTKAARPNILETESYEKTFGPKAQRKKANVAASSLEELAAITDGDHVKYQEQLELNST
LGLMGENDEEDGVSTEAKEAIFSKGQSKRIWNELYKVIDSSDVVIQVLDARDPLGTRCEV
IEKYIKKECAHKHLIFVLNKCDLVPTWVAAAWVKHLSKFHPTLAFHASITNSFGKGSLIQ
LLRQFSVLHQDRKQISVGFIGYPNTGKSSIINTLRRKKVCQVAPIPGETKVWQYITLMKR
IFLIDCPGIVPPSTKDTETDILLRGVVRVENVSNPEQFIPSVLKRCKRQHIERTYEISGW
EDTTDFLEILARKYGRLLKGGEPDETSIAKQVLNDFNRGKIPWFVPPPEDTETREGEDKK
AHHKRAREEREAAKNAETTEQLRLREDEKDLEDTEVKLD
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgggtacagctaaaaaagagaagcagagaagagttaaggagaatgaccttagagatggt
aatcttcgtgtcaagggtgagaatttctatcgagatgccaagaaggtgaaacatctgaac
atgtataaacagggccgggccgttcgtaatgccaaaggtgatattatcaaggcagcttac
ttgcaagacactaaggtccctactgctagggtagatccaaatagacgttggtttggaaac
acaagagttatttcccaagacgcattgacacatttcagagatgctttgggagagaagcaa
catgattcttaccaagtacttttgaagagaaataaattaccaatgtccttgttggaagaa
aaggatgacaccaaggctgctagacctaatattctggagactgaatcgtatgaaaagact
tttggtccaaaagctcaaagaaagaaagctaacgttgccgcttcttctttggaggaattg
gcagccataactgatggcgatcatgttaaataccaagagcaactggaattgaattctact
cttggtcttatgggagagaatgacgaagaagatggtgtttcaacagaagccaaggaagcc
attttcagcaagggacaatctaaaagaatctggaatgaactttataaagttattgactct
tctgatgtcgtcatccaagtattggatgctagagacccactcggaacacgttgtgaagta
attgaaaagtatattaagaaagagtgtgcccataagcatctgatttttgttttgaacaag
tgtgatttagtacctacatgggtagcagctgcatgggttaagcatttgtccaaatttcac
ccaaccttggcattccatgcttcaattacaaactcatttggaaaaggatctctgattcaa
cttttgagacagttttcagtattgcatcaagatcgtaaacagatctctgtcggtttcatt
gggtacccaaacacagggaaatctagtatcattaacacattgcgtcgtaagaaggtctgc
caggtggctcccattcccggagagaccaaggtgtggcagtatatcaccttgatgaaacgt
attttcctgattgattgtcctggtattgtgccaccatcaaccaaagatactgagacagac
attcttctacgaggtgttgtaagagtagagaacgtttctaatcctgaacagtttattcct
agtgttctgaagcgttgtaaaagacaacatatagagaggacatatgagatcagtggatgg
gaggatactaccgatttccttgagattctagccagaaaatacggaagacttctcaaagga
ggcgagcctgacgaaaccagtattgccaagcaagtgctcaacgatttcaacaggggtaag
attccatggttcgtgccaccgcccgaagatactgaaaccagagaaggtgaagataagaaa
gcccatcataagagagcccgtgaggaacgtgaagccgccaaaaatgctgagactaccgaa
cagttgcgtttaagggaagacgaaaaggatctcgaagatactgaagtaaaattagattag
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