Komagataella phaffii: PAS_chr4_0528
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Entry
PAS_chr4_0528 CDS
T01092
Name
(RefSeq) mRNA transport regulator, essential nuclear protein
KO
K14543
mRNA transport regulator MTR2
Organism
ppa
Komagataella phaffii
Pathway
ppa03008
Ribosome biogenesis in eukaryotes
ppa03013
Nucleocytoplasmic transport
ppa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PAS_chr4_0528
03015 mRNA surveillance pathway
PAS_chr4_0528
03008 Ribosome biogenesis in eukaryotes
PAS_chr4_0528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_chr4_0528
03009 Ribosome biogenesis [BR:
ppa03009
]
PAS_chr4_0528
Messenger RNA biogenesis [BR:
ppa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PAS_chr4_0528
Ribosome biogenesis [BR:
ppa03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
PAS_chr4_0528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mtr2
Motif
Other DBs
NCBI-GeneID:
8201004
NCBI-ProteinID:
XP_002493962
UniProt:
C4R858
LinkDB
All DBs
Position
4:complement(1032283..1032819)
Genome browser
AA seq
178 aa
AA seq
DB search
MNSDPTSKIQDFLKHILATLDSTFIQNPSLFNNDINVFKARILPQLKAQAAIVLNGTPYG
SRTQFQDIWFSVPTTQHSLLSYDAHLIPGSGSYLIQASLKIRFDETGVSKSGESCSLLPD
VPVPRLPSASTRSQWSPWFGLSLTMVVDETINTSFDIECISSFNWRITYIPEKSVYEF
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgaactcagatcccacgtccaaaattcaggacttcctgaaacacatcctggccacgtta
gactcaacgttcattcaaaatcccagtctcttcaacaatgacatcaacgttttcaaagcg
aggatccttccccaattaaaagcacaagcggcaatagtccttaatggcacaccgtatggg
tctagaacccaatttcaggacatttggttcagcgttcctacaactcagcattcactttta
tcatacgacgcccatctgataccgggttctggatcttatctcattcaagcttctctaaag
atcagatttgatgaaactggtgtcagtaagagtggagagtcctgtagtctcttacctgat
gtgccagtccccagattaccatcagcgtccaccagaagtcaatggagcccatggtttggc
ttgagcttaaccatggtggttgatgagacgataaataccagctttgacatcgaatgcatc
agttctttcaattggaggattacctatattcctgaaaagtcagtgtatgaattctaa
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