Komagataella phaffii: PAS_chr4_0587
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Entry
PAS_chr4_0587 CDS
T01092
Name
(RefSeq) Mitochondrial serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppa
Komagataella phaffii
Pathway
ppa00260
Glycine, serine and threonine metabolism
ppa00460
Cyanoamino acid metabolism
ppa00630
Glyoxylate and dicarboxylate metabolism
ppa00670
One carbon pool by folate
ppa00680
Methane metabolism
ppa01100
Metabolic pathways
ppa01110
Biosynthesis of secondary metabolites
ppa01200
Carbon metabolism
ppa01230
Biosynthesis of amino acids
ppa01240
Biosynthesis of cofactors
ppa04981
Folate transport and metabolism
Module
ppa_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PAS_chr4_0587
09102 Energy metabolism
00680 Methane metabolism
PAS_chr4_0587
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PAS_chr4_0587
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PAS_chr4_0587
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PAS_chr4_0587
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PAS_chr4_0587
Enzymes [BR:
ppa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PAS_chr4_0587
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
8200852
NCBI-ProteinID:
XP_002494026
UniProt:
C4R8C2
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All DBs
Position
4:1148331..1149824
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AA seq
497 aa
AA seq
DB search
MLKCLSRNLQRQPVIRQRSAPAAVLLRAYAIDTNSQALVSKPVQEIDPEMAQILEGEKQR
QKHSITLIPSENFTSKAVMDLLGSEMQNKYSEGYPGERYYGGNEWIDKAESLCQKRALEA
FELDPAQWGVNVQPLSGAPANLYAYSAVLEVGDRLMGLDLPHGGHLSHGYQTNATKISYI
SKYFQTMPYRLDENTGLIDYDALETSAVLFRPKVIVAGASAYARTIDYKRMREIADKVGA
YLLSDMAHISGLVSAKVTESPFPYSDIVTTTTHKSLRGPRGAMIFFRKGIRKVTKKGKEI
PYELERKINFSVFPAHQGGPHNHTISALAVALKQTQTPEFVSYQQAVVDNSKSFAESFIK
RGFQLVSGGTDTHLILVDLRNKKIDGARVENVLEKINIAANKNTVPGDVSALFPSGLRVG
TPAMTTRGFTAADFDRVAGYFEKAVAIAIDLKSGEKGSLAKEKLASFKSLAEDSAEIKKL
AQEVSEWASTFPVPGEL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtgtcttagtcgtaacctgcaaaggcagcctgtcatcaggcaaagaagtgct
cccgcggctgtgttgctgcgtgcttacgccattgacaccaactctcaagcgttagtttcg
aagcctgtacaggagattgaccctgagatggcacaaatcttggaaggagagaaacaacgt
cagaagcactcaattactttaattccttccgaaaattttacctccaaggctgtcatggat
ttgttgggatcagagatgcaaaataagtactccgagggatacccaggcgaacgttactat
ggtggtaacgaatggatagacaaggcagaaagtctttgccagaaacgtgccttggaggca
tttgagttagaccctgctcaatggggtgtcaatgttcaaccattatctggggctccagct
aatttgtatgcttactcagccgttctagaagttggagaccgtttaatgggattggatctg
cctcatggtggtcatttgtcccatggttaccaaacaaacgctaccaagatctcttatatt
tccaagtactttcagaccatgccttacagattggatgaaaatacgggattaatcgactat
gatgccttagaaaccagtgcagttttgttccgtcctaaagttatagtagctggtgcttcc
gcttatgctcgtactattgattacaaacgtatgcgagaaatcgctgacaaagtcggtgcc
tatttgttatctgatatggctcatatttcaggattggtatctgcaaaagttacggaatcc
ccattcccttactccgacattgtcactaccaccactcacaagtccctacgtggacctagg
ggtgccatgattttcttccgaaagggtatacggaaggtgaccaagaagggcaaggagatt
ccatatgagcttgagcgtaagatcaatttctctgtgtttccagctcatcagggaggacca
cacaaccacaccatctctgctcttgctgtggctctgaaacagacccaaactccagaattt
gtttcctaccaacaagctgtggtggacaactctaagtcatttgctgaatcgttcataaag
agaggatttcagttggtgtctggaggaacggacactcatttgatcttggttgatctacga
aacaagaagattgacggtgcacgtgttgagaatgtcttggagaagatcaacattgctgcc
aacaagaacactgtaccaggcgatgtttcggctttatttccttcgggattaagagttgga
actcctgcaatgacaaccagaggatttactgcagcagattttgaccgtgtcgcaggttac
tttgaaaaagcagtcgcaattgctattgacctcaaatccggagaaaagggatctttggcg
aaggaaaagctggctagtttcaagagtctcgccgaagacagtgcggaaatcaagaagctg
gcccaagaagtcagtgaatgggcttctacatttcctgttccgggggaattgtag
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