Komagataella phaffii: PAS_chr4_0654
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Entry
PAS_chr4_0654 CDS
T01092
Name
(RefSeq) Karyopherin involved in nuclear import and export
KO
K14289
exportin-5
Organism
ppa
Komagataella phaffii
Pathway
ppa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PAS_chr4_0654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppa03016
]
PAS_chr4_0654
03036 Chromosome and associated proteins [BR:
ppa03036
]
PAS_chr4_0654
Transfer RNA biogenesis [BR:
ppa03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
PAS_chr4_0654
Chromosome and associated proteins [BR:
ppa03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
PAS_chr4_0654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
YscK
Motif
Other DBs
NCBI-GeneID:
8201361
NCBI-ProteinID:
XP_002494091
UniProt:
C4R8I7
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All DBs
Position
4:join(1266285..1269726,1269758..1270047)
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AA seq
1243 aa
AA seq
DB search
MDSVGASQIVAALEVIYSMTSSNDQRRQAQEFLEKIKLEEQSPYWGYQLALPDNNNEFVV
RHFGLNLLQSAIHNDLESYDSTKRLAIRHWIVECANKVTPQDPHYIKEKIAHLWVSVAKR
CWGTHLLRTSPTPNSINTKDKLTEAALDNIQLTEDEKLDSWISMDKDLLNLWTLNEVTRE
LALVIFRTLFEDIYLLDDPIAASRQMILTSLGAEIVTSEAILNLKFVPTESVRQFRAENQ
GWLLRWAEFFEECLGILYNNQSSPETIAKSENFCLKILQTLKTSLHWTFPIALRDAKILE
LLCKAFMLPRTQIRILATDCLHVLFTRSFSNEEDFADIVGSVFKTEGIEMLSQVYQSTIL
DPDDIDEQKYTLLKKLVEMIVGLGEYLGSTSSSSAASPHQLPDDSNIEAYLKLVLSTLNH
DSLIISGLSLQFWCSLLRSDKLFQATHVELLLPDLIEACSNRLLDYTDLSEEHTSKKFLE
VDFDTTSESKVFVSNYKKFLEDIIRISICCNPEFGLNWLNNRLNQFFSSELGVKALSEKK
LKYKNEDAESYIYGVSQFHIIECAVRGVSRWEIWYDGSDLETKKQYYVRLVSDLCEKLLN
LHINDPKLLRKQIQTLVQFTPLLKTISQLMFKVLESVINSTTYEYPENATDKEREDIRDL
RTSSGTELNRLAYLIPQELKNILDQLEEVIANILSSDKVSDHEAVAFKSFLLVVSQRSMI
EDSEQRFAKIVDPELAAWSDPATEKGLLELPWFMERLGIVKIAEYFQSRRMTVDTNLLEA
DMDAAGRALRTDLKKHWESVFPIRATRILIQYSIEKLDHQSEQFQKLLALWKPRVQPIIP
HVLQLLSQIQAYHNPANWTDIPTEVQVFVKFTTLERFWQQGVSMQTKDAFMEENVKAIHT
LRDFADNVGHIVRYTREYAYLTISSISELEETLYEIPNIATLLWKALAGDSVGITLYSWR
HMFTIVMRAVFKNCPLRYVEPFLSELLPQMLPEVDKLLSTRWEKVYLRGMQTDGSGNDEA
LTEEMMEEHMLRQLTGSVDRMLIDLVGQWTNNKLSDRQMECRSVIFNNKNILAPFLQLIC
NIIMYKDTRCSFNAILIVRNILPDILLKDDEVDKYLADNLMKALLQVLMDEFFADAQLEA
GLALAYLLDVLQRLLPTLTSKAIVGFETILTSSTSLRQQRNTFQQLIATVRNLDESALKT
ARDKQLENAVHRKKHESGINKDVMDDPYLENGALNGLFNENDT
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggactccgttggtgctagtcagatagtggcggctctggaggtcatatactccatgaca
tctagcaatgatcaaagacgccaggcgcaagagttcttggagaagatcaagctggaggag
cagtcaccttactggggatatcaactggctttaccggacaacaataatgaatttgttgta
agacattttggcttaaacttattgcagtccgctatacataatgacttagaatcttatgat
agtacgaaaagattggcgataaggcattggatcgtggaatgtgctaataaggtaactcct
caggatccccattatataaaagaaaagatagctcatttgtgggtttctgtggcgaagaga
tgttggggaacgcatttattgagaacatccccaacccccaattcaatcaacacgaaggat
aaactcaccgaagcggccctagataatattcaattaacagaggatgaaaaattagatagc
tggatatccatggacaaagatcttctcaatttatggaccttaaatgaagtcactcgggaa
ctggcacttgtgatattcaggactttatttgaggacatttatttattggatgatccaatt
gcagcttccagacagatgatccttaccagcctgggcgcagaaatagtcacttctgaagca
atattaaacctgaagtttgtccccacggaatcagttcggcaattccgagcggaaaaccaa
gggtggttacttagatgggctgagttctttgaagaatgcttgggaattctttacaataat
caatcatcgcctgaaactattgcaaaatcggagaacttctgccttaagattttacaaact
ttaaagacttcgctgcattggactttccctattgctttaagagatgcaaagatactggaa
ctactttgcaaggcgtttatgcttcccaggacccaaatcaggatccttgcaacagactgt
ttgcatgttttatttacaagaagtttttccaatgaggaagattttgctgatattgttggc
tccgtgtttaaaactgaaggaatcgaaatgctttctcaagtctatcagtcaaccatactg
gacccggacgatattgatgaacagaagtacacactgcttaaaaaactagtcgaaatgatt
gtgggccttggagaatatctgggatccacttcctcgtcgtcagcagcctcacctcaccaa
cttcctgatgactctaatatagaagcctacttgaaattggtgttatccaccctaaatcat
gattcattaataatttcaggcttatctcttcagttctggtgttcgctgctccgatctgac
aagttgtttcaagctactcatgttgaattgttgttgccagatctaatcgaagcttgctcc
aatagactgctggattatacagatctgtcagaagaacacacatcaaaaaaattccttgaa
gttgactttgatacgactagtgaatctaaagtgtttgtcagcaactataaaaaattcctg
gaagatataattaggataagcatttgttgtaatcctgaatttgggctgaattggctgaac
aacagattaaatcaatttttcagttccgaacttggagtgaaagcactatctgagaagaag
ctgaagtacaaaaacgaagatgctgagtcgtatatttatggtgtctcacaatttcatatt
attgaatgtgcagtgcgtggggtatcaagatgggagatttggtacgatggtagtgattta
gaaacgaaaaaacaatactatgttcggttggttagtgatctttgtgagaagctactgaat
ttacatattaacgacccaaaactactaagaaaacaaattcaaaccctggtccaatttacc
ccgctcttgaagacaatttctcaattgatgtttaaggtactggagagtgttatcaattct
actacttatgaatatccggaaaacgctactgataaagaacgtgaggacattagggattta
cgtaccagtagtgggacagagctaaacaggctagcatacttgataccacaagaattgaaa
aacattctcgatcagttggaagaagtgattgcaaacattttatcttccgataaagttagt
gatcacgaggctgttgctttcaaatcctttttattggttgtgtcccaaagatctatgatt
gaagacagcgaacaaagatttgcaaagattgttgatccggagttagctgcttggtctgat
ccagcaactgaaaagggacttttggaactcccttggttcatggaaaggttaggaattgtg
aaaatcgctgaatatttccagagcagaaggatgacagtcgacacaaacctattggaggcg
gatatggatgctgccggaagagccttgcgaactgaccttaagaaacattgggagtcagta
tttccaatcagagccactcgaatcttgattcagtacagtatagaaaagttggatcatcag
tcggagcaatttcaaaagcttcttgcattatggaagcctagagtccaaccaattattcca
cacgtattgcaacttctatcacaaattcaagcataccataacccagccaattggactgac
attccaactgaagttcaagtgtttgtcaagtttacaactttggaacggttttggcaacag
ggggtttcaatgcagactaaggatgcctttatggaagaaaatgtgaaagccattcacact
ttgagagatttcgcagataatgtcggccacattgttagatacactcgggagtacgcatat
ttaacaataagttccatttctgaactagaagagacgttgtacgaaatccctaacattgct
acattgctctggaaagcattagccggtgatagcgtgggtattacattatattcttggaga
catatgtttactattgtgatgagggctgtgtttaaaaattgccccctgaggtacgtagaa
ccgtttttaagtgagctgctaccccagatgttaccggaagtggataaacttttgagcact
cgctgggaaaaagtttatttgcgaggaatgcagaccgatggttctggaaacgacgaagct
ctaactgaagagatgatggaggagcatatgttgcgacaacttacaggctcagtggatcga
atgctaattgatctagtaggacagtggacaaataacaagctaagtgacagacaaatggag
tgcagatcagtcatctttaacaacaaaaatattctagctccttttttgcagctaatttgc
aatattatcatgtacaaagatacaagatgttcgttcaatgctattctaattgttaggaat
attctacctgacattttactgaaagatgatgaggtagacaaataccttgctgataactta
atgaaagcactgctacaggttctgatggatgaattctttgctgatgctcagcttgaagca
ggactagcgctggcttatttactggatgttctccagagattgcttccaacactgacttcg
aaggctatagttggatttgaaacaattttaacctcgtcgactagtctaaggcagcaaaga
aacacattccaacaactgatagccacagtaagaaacttagacgagagtgcattaaaaacc
gcaagagataagcagctggagaatgcagttcacaggaagaaacacgaatctggtatcaac
aaagatgttatggacgatccctacctggaaaatggagcattaaatggtttattcaatgaa
aatgatacctaa
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