Komagataella phaffii: PAS_chr4_0667
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Entry
PAS_chr4_0667 CDS
T01092
Name
(RefSeq) Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
ppa
Komagataella phaffii
Pathway
ppa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PAS_chr4_0667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppa03009
]
PAS_chr4_0667
Ribosome biogenesis [BR:
ppa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PAS_chr4_0667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp14
Chap-C
SANTA
Motif
Other DBs
NCBI-GeneID:
8201374
NCBI-ProteinID:
XP_002494104
UniProt:
C4R8K0
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Position
4:1289230..1291824
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AA seq
864 aa
AA seq
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MAKRSNKQSRSKTNRRIQDALQIAEKSERYQKSSRNQGSDDSDTDGAIMNAKRYVQGDYG
DDNEEFVDEEIDSDEAFGPDDDFETFKSKGTDKTTAKGKGRGKPSHLEDEDEVDEEEDSE
DEEGLVTLSQAWDMDDSEKRKANFAKSTQQLILNDNIDSAESSSEADSSSEEEEEEDPFA
EMESYDEDEVELNTVVKDLDDADKNKNRVLINPKDEEDEYKVPTTGHKLSLKQMLEATGD
SSISQDNFLLRRKLVDGSESATMAVPLPKRLQQRKEREAAYELSKAEADKWQDTVKSLRE
AEHLVFPLQPQKDSDEELEEPEAKELKPLTKLETAVNEVLKASSLLDDKKESTFEEMATA
KMNPADLRRRQNELRMMRELMFREERKAKRIKKIKSKTYHKIKKKERLRTEQLVEGDESD
EEEHDSKRALERMSLKHKTNGQWAKSIIKSGMSKDKSVRDELEETLRQGERLRAKIQGDE
DYSDARSISDLESDGEESDPELRSKIGKGVMNMDFMKKAEAKQKAANKEELERLRRFQEY
GQEDDLDEFRNESTSANVVLNTGRRVYTPGAALEHKEIEEENVKVLEEHEIDNAKSLTNK
LSKTVHREKSKNAEDAVKESESQNEKQPEEENDSTVNPWLTITTNGSTHKSKKVRVIDKD
SSKSEKAAAKLTKTKKRSNAHLEEDGPIVDMNERLKIVDPYGSDEDDEDGSNVRMFKQTE
LIREAFAGDDVIDEFQKEKEAIIKADGDKEVDLTLPGWGDWAGSDIKKKRRRKTVKVAGV
VSEERRKDRQLNSVIINEKVNKKNLKYRTDKVPYPFETMAQYEQSLRTPLGQEWITRTTH
QELITPRVIVNHGAVVDPLDAPFK
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggccaagagatcaaacaagcaaagtagatccaagaccaatagaaggattcaggatgcc
ttgcagatagctgagaaatcagaaaggtatcagaagagttcaaggaaccagggttctgac
gactctgataccgatggtgccatcatgaacgcgaagaggtatgttcaaggagactatgga
gacgataacgaagagttcgtcgacgaggagattgactctgatgaggcatttggtccagat
gatgattttgaaacttttaaatccaagggcacagacaaaacaacagcaaaaggcaaagga
agagggaagccctcccatttggaagacgaagatgaggtcgacgaagaagaagacagcgaa
gatgaggagggacttgttactctttctcaagcttgggatatggatgattccgaaaagagg
aaggcaaattttgccaaaagcactcaacagttgatattgaacgacaacattgattctgct
gaatctagctcagaagctgattcctcgtccgaagaagaggaagaagaggacccgtttgca
gaaatggaatcatatgatgaagacgaagttgagttaaacacagttgttaaagatttggat
gatgccgacaagaataagaacagagttttgattaatcctaaagacgaggaagatgaatat
aaggtacccaccacaggccacaagctatctcttaaacagatgttggaggcaactggggat
tccagtatttcccaagataactttttacttagaaggaagcttgttgacggcagcgagtcc
gctactatggctgtaccgttacccaagagactacaacaaagaaaagagagagaagccgcg
tacgagctctctaaagctgaggctgacaagtggcaagatactgtgaagtcattaagagaa
gcagagcatttggtatttcctcttcaaccacagaaggattctgacgaagaactagaagag
ccagaagctaaggaactgaaacctctgaccaaactggaaaccgctgttaacgaagtattg
aaagcctcttcattacttgatgacaagaaggaatctacttttgaagaaatggccaccgcc
aaaatgaaccccgctgaccttcgtcgtaggcaaaacgaattgcgaatgatgcgagagttg
atgtttcgagaggaacgtaaggctaagagaataaagaagattaaatctaagacttatcac
aagattaaaaagaaggaacgtctcagaactgagcaacttgttgaaggtgatgaatctgat
gaggaggaacacgattccaagagggcccttgaaagaatgtccttgaaacacaaaacaaat
ggacaatgggctaaatctataatcaaaagtggaatgtcaaaggataaatctgttagagat
gagcttgaagagactttgagacaaggagaacgtttaagagccaagatccagggagatgag
gattacagcgatgctcgcagtatttcagatttggaatcagatggagaggaatctgatcct
gagcttagatctaagatcggtaagggagtgatgaacatggattttatgaagaaagctgaa
gccaaacagaaagcagcaaacaaagaagaattagaaagattgaggagattccaagaatac
ggccaagaagacgatcttgatgaattccgcaacgagtccacctctgcaaacgttgtatta
aacacagggagacgagtctacactccaggtgctgctcttgagcacaaagagatcgaagag
gaaaatgtgaaggtattggaagaacacgaaatcgacaacgcaaaaagcttaaccaacaaa
ttgagtaaaacggtacatcgtgaaaaatcaaaaaatgctgaagatgcagtcaaagagtcc
gaatctcagaatgagaagcaacctgaagaagagaatgatagcactgttaatccttggctg
acgatcactactaatggtagcactcacaaatccaagaaggtaagagtaattgacaaagac
tcatcaaaatcagaaaaagcagcagccaaattgaccaagacaaagaaaagaagtaacgca
catttagaagaagacgggccgatagttgatatgaacgaacgactgaagattgtggatccc
tatggttctgatgaggatgacgaagatgggtctaacgtccgaatgttcaaacagacagaa
cttattcgtgaagcttttgccggagacgatgtgatagatgaatttcaaaaggaaaaagag
gctatcataaaggctgatggtgacaaagaggtagatttgactctacccggatggggggat
tgggccggatcagatatcaagaaaaagagacggcgaaagacggtcaaggttgccggcgtt
gtttcggaagaaagacgaaaggacaggcaattaaacagtgtcattatcaacgagaaggtt
aataaaaagaatctgaagtataggactgacaaagttccataccccttcgagaccatggct
cagtatgaacagtcgctccgtacaccattgggacaggaatggatcactagaacaactcac
caagaactcatcactccccgtgtgattgtcaaccatggtgctgtcgttgatcctttagat
gcacctttcaagtaa
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