Komagataella phaffii: PAS_chr4_0719
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Entry
PAS_chr4_0719 CDS
T01092
Name
(RefSeq) GTPase activating protein (GAP) for Gsp1p, involved in nuclear transport
KO
K14319
Ran GTPase-activating protein 1
Organism
ppa
Komagataella phaffii
Pathway
ppa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PAS_chr4_0719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppa03019
]
PAS_chr4_0719
Messenger RNA biogenesis [BR:
ppa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
PAS_chr4_0719
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_8
SGT1
LRR_NXF1-5
TAdV_Fibre-like_head
Motif
Other DBs
NCBI-GeneID:
8200614
NCBI-ProteinID:
XP_002494159
UniProt:
C4R8Q5
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Position
4:complement(1375367..1376629)
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AA seq
420 aa
AA seq
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MATQFVIDLGIKEEETYSISNKSLKFDTPDDISPYLEELNKIPHLKKIDFSGNTIGVDPS
KLLAEALLKHAETIVEVNFADFFTGRLKDEIPRSLGYLLPALLECHKLRVLNLSDNAFGL
QTIDPIESFLAQAVSLEHLILSNNGMGPYAGSRIGKSLYKLSVAKSKTQNAPDSLKTFYC
GRNRLESGSVNYLAIGLRAHKNLESVRLYQNGIRPAGVSKLILQGLKANTELKVFDLQDN
TFTFKGAKALSVSLPSWSSLKEINVNDCLLNPKGSFEFAKALKEGDVSKELEILKLQYNE
LEANSLELLVESIDKFPNLKVLELNGNRFEEDSALIEKLSSIFEERGTGELDELDDLEEV
DSEEEDEEEEEEETDNEEDDTDLDQLQEKLDREIAGVEITKGDEVVDELAEELKKSSINQ
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcagttcgttattgatctaggaatcaaggaagaagagacctactccatctca
aacaaatcactgaaatttgacacccccgatgacatatcaccatatcttgaagagctcaac
aagattcctcatttgaagaaaattgactttagtggcaacaccatcggcgtggatccaagt
aaattgttagcagaagcgttattgaagcatgctgaaaccattgttgaagttaattttgct
gacttctttactggaaggttaaaggatgagattccaagatctctagggtatctgcttcca
gcgttgctagaatgtcataaactccgtgtgttgaatctcagcgataatgcatttggcttg
caaacaattgatccgattgagagcttcttggcccaggccgtttctttggaacacctgatc
ctatctaataatggtatgggtccttatgctggttctagaatcggaaaatcattgtacaag
ttgagtgttgccaaatccaagacccaaaacgctcctgactctttgaaaactttctactgt
ggaaggaacagactggaaagtggatcggttaactatctggccattggtcttagagcccat
aagaatttggagagtgttagattgtaccaaaatggtattaggcccgccggtgtaagcaag
ttaattcttcaaggattgaaagcaaataccgaactaaaagtttttgatttgcaggacaat
actttcacttttaaaggtgctaaggcacttagtgtttcccttcctagttggtcctcgttg
aaggaaattaatgtaaacgactgtttactgaaccccaaaggttcttttgaatttgctaaa
gctctgaaggaaggggatgtcagtaaagaattggagattcttaagttgcaatacaatgaa
cttgaagccaattccctagaattgttggtagagtctattgacaagttcccaaacctgaaa
gttttggaattgaatggtaaccgttttgaagaagattctgcattgatcgagaagcttagc
tcaatttttgaagaaagaggtaccggtgaactggacgagttagatgatttggaagaagtt
gacagcgaggaagaagatgaggaggaagaggaagaagaaactgacaacgaagaagatgat
accgacttggatcaattgcaggaaaaacttgacagagaaatcgctggagtggagattacc
aaaggcgatgaagttgttgatgaattagctgaggaattgaaaaaatcgtcaatcaaccaa
taa
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