Komagataella phaffii: PAS_chr4_0751
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Entry
PAS_chr4_0751 CDS
T01092
Name
(RefSeq) Subunit of the telomeric Ku complex (Yku70p-Yku80p), involved in telomere length maintenance
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ppa
Komagataella phaffii
Pathway
ppa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PAS_chr4_0751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppa03400
]
PAS_chr4_0751
DNA repair and recombination proteins [BR:
ppa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
PAS_chr4_0751
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-GeneID:
8200644
NCBI-ProteinID:
XP_002494192
UniProt:
C4R8T8
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Position
4:complement(1424823..1426913)
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AA seq
696 aa
AA seq
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MDKEWTLFVVDESPLVKNLDKAIEYIKGILLSKVVRGKKNDQVSIITCHDELIQVKPKRG
RIHTSFSMPSYQLIQDLDSTLHVNHEPLEYDEKGLIEDGSLSETLLLAFEELVRATKSGA
KKTSTKASVGKCNMIVFTNHTANNELEISLIEGLSVLAVDLNCRLTIIDLDPKGKKYDET
IADLKEKNLFKWNELILKIKSKSNDKPSQSATINIDKALDLLRDWKKGIPKIYKPTRTFN
GELRLCCDLDSIDLENASFSNDREYNRHTDPISLVINVEGYPLIKEEKKPSAKHMGYASD
EEPKSVKLLRDRIVKQRITPADEEIDTKKEDDREEKEDTDDIEIKYEEIPVDNESLMKTY
RYGTSLIPLTSTFNELLKYPTYSGIDIRGFVKKDRLPSFFFMGEPTLLIGGEATRDRVAF
AAMCQSLLDVDSVGIIRYTLRSSSGVFMGALIPFLVNAHITLDKGPDGLKREFDETKNQN
VYGMALHMLPFKEDQKLPFLFNLIGVKENDDYLPSEAMLDQMDEFVDLMNIDDPKTEKPA
IACFETHDFDSNLPLPLPNVESKLDNTWNKILHSRSPSIHIFNKILRDIVNEFNIKNQEE
GESLGKAILNDPKKVDKVIKSSFDQLVESKDKLVVDLKQIDEERYNKISKSLATVLDNKL
ITEEAKSNGKKRVTDEMFVKDEGDLEEIDIDALLMY
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggataaggaatggacattgtttgtagtagatgagtctcccttggtgaaaaatctagac
aaagcaattgagtacatcaagggaattctgttgagcaaagttgttagagggaaaaaaaac
gaccaagttagcataattacctgtcatgatgagcttatccaagtgaaacccaaacgaggc
aggatccatacttccttctccatgccgtcatatcagttgattcaggatctggactcaacg
cttcatgttaatcatgagcctttagagtatgatgagaaaggcttgattgaagacggatcg
ctttctgaaactctgttgctggcatttgaggagttggtacgggctaccaaatctggagcc
aaaaagacaagcacaaaggcatcagtgggaaaatgcaacatgatcgtgtttacaaaccat
acggctaataatgaactggaaatatctttaattgagggattaagtgtcttggccgttgac
cttaactgtagacttactatcattgatttggatccaaaggggaaaaaatatgatgaaaca
attgccgatttgaaagaaaaaaacctttttaaatggaatgaactgatcttgaaaattaag
tctaagtctaatgacaaaccaagccaatctgccaccatcaacattgacaaggctctggat
ctgttgagagattggaaaaagggtattcctaagatttacaaaccaaccaggacctttaat
ggagaattaagattgtgttgtgatcttgatagcatagatttagagaatgcaagtttttct
aacgatcgggaatataatcgacacacagatccaatttcgttagtgattaatgttgaagga
tatccattgattaaagaagagaagaagccttctgcgaagcacatgggatatgcatcggat
gaagagcctaaatcggtaaaacttttacgagaccgtattgtcaaacaaagaattacacca
gcagatgaggaaatcgatacaaagaaagaggacgacagggaggagaaggaggatacagat
gacatcgagatcaagtatgaggagataccggttgataatgaatcattaatgaaaacttat
cggtatggaactagtttgatcccgctcacgagcactttcaacgaactcttgaaatatcct
acatattctggtatcgatatacgaggtttcgtgaagaaggatagattaccatcttttttt
ttcatgggagagccaactttacttattggcggagaagctacacgggatcgggtggctttt
gctgccatgtgccaatctctcttagatgttgacagtgttggtattatcaggtatactctg
agaagctcctctggagtgtttatgggtgcgttgatcccgttcttagtgaatgctcatatt
accctggacaaaggtcctgatggattgaaaagagaatttgatgaaacgaagaaccagaat
gtatatggtatggccttgcatatgcttcctttcaaggaagatcaaaaacttccattcttg
tttaatctcattggagtcaaagagaatgatgattatttgccgtccgaagcgatgctggat
cagatggacgagtttgttgatttgatgaatattgatgatcccaagacggagaaaccagct
atagcatgtttcgaaacccatgattttgattccaatttgccgttgccattaccgaatgtt
gaatcaaaattagataatacttggaacaaaatcttacacagcagatcaccttccattcat
atattcaacaagatattgagagatattgttaacgagttcaacataaagaaccaggaggag
ggagaatctttgggcaaagctattttgaacgacccaaaaaaggtagacaaagttatcaaa
tcgtcatttgaccaacttgtggagtcaaaggataagttggttgttgacctgaagcaaatt
gacgaagaaaggtacaacaaaatatccaaaagcttggctacagtcttggacaacaagttg
ataaccgaagaagctaaaagtaacggaaagaaaagagttacggacgagatgtttgtcaag
gatgagggagacttggaagagattgacattgacgctctcctgatgtattag
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