Komagataella phaffii: PAS_chr4_0759
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Entry
PAS_chr4_0759 CDS
T01092
Name
(RefSeq) C3HC4-type RING-finger peroxisomal membrane peroxin
KO
K13345
peroxin-12
Organism
ppa
Komagataella phaffii
Pathway
ppa04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PAS_chr4_0759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppa04121
]
PAS_chr4_0759
Ubiquitin system [BR:
ppa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
PAS_chr4_0759
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_2
Rad50_zn_hook
zf-C3HC4
Peroxin-13_N
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
TRAF3_RING
Zf_2nd_IFT121
Motif
Other DBs
NCBI-GeneID:
8200652
NCBI-ProteinID:
XP_002494202
UniProt:
C4R8U8
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Position
4:complement(1439626..1440855)
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AA seq
409 aa
AA seq
DB search
MDFYSNLDSRSLDSETPTLFEIISAQELEKLLTPSIRYILVHYTQRYPRYLLKVANHFDE
LNLAIRGFIEFRQLSHWNSTFIDKFYGLKKVRNHQTISTERLQSQVPTLLEQRRRLSKTQ
IAVSLFEIVGVPYLRDKLDHLYDKLYPKLMMNNLDPKESLKTFVQYYFLKLYPILLSVLT
TIQVLLQVLYLSGTFKSPSIIMWLFKMKYARLNSYDYNLDEQRVNKFLNKTSAGKLGTGN
NRIRPITLTESLYLLYSDLTRPLKKGLLITGGTLFPASIFLLKFLEWWNSSDFATKMNKP
RNPFSDSELPPPINLSKDLLADRKIKKLLKKSQSNDGTCPLCHKQITNPAVIETGYVFCY
TCIFKHLTSSELDEETGGRCPITGRRLLGCRINKTTGEWTVDGIRRLMM
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggatttttactccaatttggactcaaggtccttggattcagagactcccactctattt
gaaataatttctgcacaggagctggagaaactgctgactccatccattcgatatatctta
gtccattatacgcaacgctatcctcggtacttgctgaaggtggctaatcattttgatgaa
ctgaatctggctattcggggatttattgaatttcgacaactgagtcattggaactccaca
tttatcgataagttttatgggttgaagaaagttcgcaaccaccaaacaatatccaccgaa
cggctacaatcacaggttcctaccctattagagcaaaggcgaaggctttcaaagacccag
atagccgtatctttgtttgagattgtaggcgtgccatatttaagagataagctggaccat
ttgtatgacaagctctatccgaagctaatgatgaacaatctagaccccaaagaaagcctc
aaaacgtttgttcaatactactttttgaagctgtaccccatattgttgagtgtattgacc
acaattcaagtcttgttgcaggttttgtatctttcaggcacattcaaatctccgtccatc
attatgtggttattcaagatgaaatatgctagattgaacagctatgactacaacctggat
gaacagagagttaacaagtttctcaataagacatctgccgggaaattgggaacggggaat
aatagaattaggcctatcacgttgacagagtcattgtatttactgtattccgatctaact
cgtccattaaagaaaggattactaatcacaggaggaacactattcccagcatcaatcttt
ctcttgaagtttctggaatggtggaattcctctgattttgcaactaaaatgaacaaacca
agaaatccattcagcgactcagagttaccgcccccaataaacctttcaaaagacttactt
gctgatagaaaaatcaagaaacttttgaagaagtcacagagcaatgacggtacttgccct
ctttgccataaacagattaccaatcctgccgtcatcgaaacgggatatgtattttgctac
acctgtattttcaagcatctcactagctctgagctggatgaagagactggaggaagatgt
ccaatcacaggtagaagactcctcggatgccgaattaacaagactacaggagagtggact
gtggacggaatccgtcgcctaatgatgtag
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