Komagataella phaffii: PAS_chr4_0760
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Entry
PAS_chr4_0760 CDS
T01092
Name
(RefSeq) Protein required for transcription of rDNA by RNA polymerase I
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppa03021
]
PAS_chr4_0760
Transcription machinery [BR:
ppa03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
PAS_chr4_0760
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRN3
Nop14
DNA_pol_phi
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
8200653
NCBI-ProteinID:
XP_002494203
UniProt:
C4R8U9
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Position
4:complement(1441051..1442790)
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AA seq
579 aa
AA seq
DB search
MMMSLQPSSKHSIDEHSESNSKRIRIDSSDKTSFSDKMIKSYIKSIIDSLDNEESLDKMD
KLIYKLSLPLSHPESLQTDQLTAIFSILSSEIGKIDTRKCHGLIQGLLNVETKDSDLSTT
YCKFLCVLVSASPKWVVEIVSKLVSRFVEGNVKLLHDTLKYIISVVPTSTNIIQKQLAKK
FPNRNDKKKYLVHYVENLLYVSEYCPQLGLSCWSLIVENCIKLDVELQNEIEEADDEDLE
AMEGTEDGDDNENDSDSASEDDDSDDDEDDADDFDESVALDEGPEAIDVADLSAKLDSIM
MILMKTTDSYFVSSDDKPLITFNNLISMFRTHILPTHYTRVVQYLLFHVTQYQSELMDSF
LVTLIDVAFQPKEMVSKRIKSMQYLASYMARAKNVSKSQIVFIISYLISWIEKYIHEREE
EINDGRGMDRFKMFYSVFQSVLYIFCFRYSSLKTDANTWECNLDKFFQRVIMSKFNPLKF
CNDNVVLIFARISQEQDICYCYSIIESNKCERRKGLTGSTSSTNPTTGSGISWDLTSKQE
FSDLAAYFPFDPLFLRRTAKFISPNYIEWDNHDESDSDY
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtctttacagccaagtagtaaacacagcatagatgagcatagcgaatccaat
tcgaaacggatacgaatagactcgtctgacaagacatcattttctgacaaaatgatcaaa
tcctacatcaaatctatcatagactccttagacaatgaggagagtttggataaaatggat
aaactgatatacaaactctcgttgcccctatcgcatccggaaagcttacagactgaccag
ttaactgccatatttagtatcctaagcagtgaaattgggaaaatagatacccgcaaatgt
catggtttaattcaaggtctccttaacgtcgagactaaggattcagacttaagtacaaca
tattgcaagttcctttgtgttctagtttctgcctcacctaagtgggtggtagagattgtt
tctaagctggtgtctcgttttgtggaaggcaatgttaagctacttcatgacactcttaag
tatattatttccgtggtgcctacatcgaccaacatcatccagaaacagctcgccaagaag
ttccctaatagaaacgacaagaaaaagtatctggttcactacgttgagaatttgctttac
gtcagtgagtattgtccccagttgggcttgagttgctggagtttgattgtggaaaactgt
atcaaattagacgtcgaactacagaatgaaatagaagaagctgatgacgaagatttagag
gctatggagggcacggaagatggtgatgacaacgaaaatgattccgatagtgcaagtgaa
gatgacgattccgatgacgatgaagacgatgcagatgacttcgatgaaagtgttgctcta
gatgaaggcccagaggctattgacgtagcggatctttcagctaaattagattccatcatg
atgatcttgatgaagacaacagattcatactttgtatcttctgatgataaaccactaatc
acgttcaacaatctcatatcaatgttcagaactcatattttacctacgcactacaccaga
gttgttcagtatcttctatttcatgtcacacaataccaatctgaactgatggactcattt
ttagtcacactgatagatgtggcttttcagcccaaggaaatggtttccaagagaatcaag
tccatgcaatatcttgcctcatatatggcaagagctaagaacgtgtcgaaatctcagatt
gtgttcattatcagctatttaatctcctggatagagaaatacatccacgaaagagaagaa
gaaatcaatgatggtagaggaatggatcgtttcaaaatgttctactctgtatttcaatca
gtactctacatattttgcttccgctattcgtctttaaagactgatgcaaacacatgggaa
tgcaacctggacaagtttttccagagggtcataatgtccaagtttaacccgctcaagttt
tgcaatgacaacgttgttttgatctttgcccgcatatcccaagaacaggatatctgctat
tgttattccatcattgaatctaataagtgcgagcgtcgaaaaggtctaaccggttccact
tcatcaaccaacccaacgacaggttcaggaatttcatgggatctcacatcaaaacaggag
ttttcggacctagcggcctattttccatttgatcctttatttctgagacgaacagccaag
tttatcagtcccaactacattgaatgggataatcatgacgagagtgacagtgattattag
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