Komagataella phaffii: PAS_chr4_0782
Help
Entry
PAS_chr4_0782 CDS
T01092
Name
(RefSeq) hypothetical protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ppa
Komagataella phaffii
Pathway
ppa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PAS_chr4_0782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppa03041
]
PAS_chr4_0782
Spliceosome [BR:
ppa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
PAS_chr4_0782
Complex C
U4/U6.U5 tri-SnRNP related factors
PAS_chr4_0782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
8200560
NCBI-ProteinID:
XP_002494227
UniProt:
C4R8X3
LinkDB
All DBs
Position
4:complement(1482998..1483618)
Genome browser
AA seq
206 aa
AA seq
DB search
MTSVKDSITIDRGLAQNVEKIHGVNPVFLIDKILREKILDSLFWKKHCFLLDILELQDLA
SEVEIIGTYDTNQNSRATDYICLLLKMLQLQPKDEIVIYMLTQPYFKYVTALAALYIRLV
FPSVRVYQLLEPLLNDYRKLRIRKHGNADLTYVDQLVDELLTEEKFCGLTLPRLVNRLRL
EDDGLLDPRESELQSELENEEDDIGG
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtgtgaaagactccatcactattgacagagggctggcacagaatgttgaaaag
atccatggagttaaccctgtgtttttgatagacaaaattctcagggaaaaaatcttagat
agtctgttttggaaaaaacactgctttctactagatattctggaactgcaagatcttgca
agtgaagtggagattattggcacatacgacaccaatcaaaactctagagcaaccgactat
atttgtctgttactgaaaatgctacagttacagccgaaagacgagatagtgatatacatg
ttgacccaaccctatttcaagtatgtgacagctctggcagcgttgtatattcggttggtt
ttcccttctgtgagagtttatcagttgttagagccgttattgaatgactatagaaaactg
cgaataagaaagcacggcaacgctgacttgacctacgtggatcagctggtagatgagtta
ttaactgaggagaagttttgtgggttaacactacccagattggtcaaccgattgcgactg
gaggatgacggtctactagaccctagagaaagtgaactacagagcgagttagaaaatgag
gaagatgatattgggggttga
DBGET
integrated database retrieval system