Komagataella phaffii: PAS_chr4_0798
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Entry
PAS_chr4_0798 CDS
T01092
Name
(RefSeq) Essential beta-coat protein of the COPI coatomer
KO
K17301
coatomer subunit beta
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppa04131
]
PAS_chr4_0798
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppa04147
]
PAS_chr4_0798
Membrane trafficking [BR:
ppa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
PAS_chr4_0798
Exosome [BR:
ppa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
PAS_chr4_0798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
Cnd1
HEAT_2
HEAT
AP4E_app_platf
Coatomer_g_Cpla
HEAT_EZ
TPR_Trm732_C
HEAT_GCN1
DUF5677
Motif
Other DBs
NCBI-GeneID:
8200576
NCBI-ProteinID:
XP_002494246
UniProt:
C4R8Z2
LinkDB
All DBs
Position
4:join(1513629..1513661,1513714..1516527)
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AA seq
948 aa
AA seq
DB search
MSDVAYTILGESNFHEQLTVQEFKTLLEKGRDEEKIDTMKKVLITMLNGNLMPSLLMHII
RFVMPSKNKELKKLLYFYWEICPKYEENGKLRQEMILVCNAIQHDLAHPNEYIRGNTLRF
VTKLKEPELIEPLIPPIRQCLEHRHAYVRKNAAFAIYSIFKVSDHLLPDAAEVLGNFLAV
ETDTTCKRNAFACLGQLNREMALGYLQEQLADLVSLDSLLQLAFIEFIRKDSIVAPELRE
QYLSIVSELLDSPSSSVGYEAAITLTVLTNSQIEVASAASKFIDLAIKEANTTVKTIALE
RLRELYLRNVGILDDYVLDVLRILTTSDLGVRKKALDLSLDITSSGNVDDVVKFLKKELT
KSISSNEDKSIEYRQLLITAIHKCALNFNSVAADVVDLLLGFIEQLNSAAASEVVSFAKE
VVEKFPALRSKIINRLLHALENVKSGKVYRGSLWILSEYAEEEKDIQDVWRHIRNKIGEL
PILSTEKRLQNKEAVVSNENDENGYTNGSSKPIILPDGSYATENAFTAELEKHVEDKTGE
ERPTLRALILDGDFYLAAVLSSTLLKLILSFQKISSNTKILNAMKAEAMLIMVSILRVGE
TSFSKKKIDEDSQERIFSIVRFLAENKTDDDFIQHAFLDDTKTAFRNLLIEADKKKAQKD
KSKLQQAAQQPYDSISFRQFSKEVDTEEYSLEEQLAASTKDDLSSKLKKIVQLTGFSDSV
YAEAYVKVHQFDVVLDVLLVNQTTETLRNLTVEFAALGDLKVIDKPGTQNVGPHGFLRIQ
ATIKVTSADTGVIFGNIIYDGEKANDSNIVILNDINVDIMDYIKPATCSEAQFRKMWNEF
EWENKIIVKSNVATLKEYLDVLLKGTNMNCLTPGAIIGEECQFLSANLYSHSSFGEDALA
NLCIEKQADGPIIGHVRIRSKGQGLALSMGDRVAAIARQSNTATVSVV
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgttgcttatacgattcttggtgaatcgaattttcacgaacagctcacggtt
caggagttcaagaccttgcttgagaaaggtagagatgaagaaaagattgacaccatgaaa
aaggtccttatcaccatgctaaacggtaatttaatgccttcattgttgatgcacattatc
cgatttgttatgccttcaaagaacaaggaattgaaaaaattgctctatttctattgggag
atttgtccaaaatacgaagagaatggtaagctcaggcaagaaatgattctcgtctgtaat
gctattcaacatgatcttgctcacccaaatgagtacattagaggtaacacattgcggttc
gtcactaaattaaaagaaccagaactgatagagccattgatccctcctattcgtcagtgt
ttggagcatagacacgcctatgtcagaaagaatgctgcgtttgcaatctattcgattttc
aaagtatctgaccacttgttgccagatgccgcagaagttctagggaacttcttggctgtg
gagacggataccacttgtaaacgtaacgctttcgcctgtctgggtcaattaaaccgtgaa
atggctcttggctatttacaggaacagcttgctgatttggtgagtcttgactcacttttg
caattggcctttattgagtttattcgcaaagattcaattgtcgctccggagttaagagag
caatatctgagtattgtatcagagttgttggattctccaagtagctcggtcggttacgag
gcagcaattacattgactgtattgaccaattcgcagattgaggttgccagtgctgcttcc
aagttcatcgatttagcaatcaaagaagctaacaccactgtcaagacaattgcccttgaa
agacttagagagctatatctaagaaatgttggcatcttagacgattacgtgttagatgtg
cttagaattctcactacttctgacttgggtgtccgtaagaaggctttagatttatctctg
gatattacctccagtggcaatgttgatgatgtcgtgaaattcctgaagaaagaattgacg
aaatctatatcctcaaatgaggacaaatcaatagagtatcgccagctgcttatcacggca
attcacaaatgtgccttgaactttaacagtgttgcagcagatgttgttgatctgttgttg
ggatttatcgaacaactgaattctgctgccgcatcagaggtagtttcatttgccaaagag
gtggtagagaagttcccggccttgagatccaaaatcatcaatcgtttattacatgccttg
gagaacgttaaaagtggaaaggtttacagaggttccttgtggattttgagtgaatatgct
gaagaagaaaaggatatccaggacgtatggagacatattcgtaataaaattggtgaactt
ccaattttaagtactgaaaagagactgcaaaacaaagaagctgttgtctccaacgaaaat
gatgaaaatggatatactaatggctcaagcaaaccaattattttgcctgatggttcatac
gcaacagaaaatgcatttacagccgagttggagaaacatgttgaagataaaactggggag
gagaggccaacattgcgtgctttgattttagatggagacttttatcttgcagcagttctc
tcttcgaccttactcaagcttatcctgagttttcagaaaatttcgtccaacaccaagatt
ctcaatgcaatgaaggctgaagcaatgttgattatggtttcgattttaagagttggtgaa
acttccttttccaagaaaaagattgacgaagattcccaagagcgtattttctctatagtc
agattcttggctgaaaacaaaacagacgatgacttcatccaacatgcgtttttggatgat
acaaaaactgctttcagaaacttgctcattgaagctgataagaaaaaggcccagaaagat
aagtcaaagttgcagcaagctgcccaacaaccatacgacagtatttcattcaggcaattt
tccaaagaagttgacactgaagaatactcattggaggaacaacttgcggcttccactaag
gatgatctgtcctccaaattaaaaaagatagtccaactaactggcttctctgattccgta
tatgctgaggcatatgtgaaagttcatcaattcgatgttgttcttgatgtcctcttggtc
aatcaaactactgagactttgcgtaacttaactgtggaatttgctgctttgggtgatcta
aaagtcatagataaaccgggaacacaaaatgttgggcctcatgggttccttagaattcaa
gctactattaaagttacttctgctgacactggggtcatctttggtaacatcatttacgat
ggagaaaaagccaacgacagtaacatcgtgattttgaatgatatcaacgtggacatcatg
gactacattaagcccgctacatgctcagaggcccaattccgtaaaatgtggaacgaattt
gagtgggaaaacaagattattgttaagtctaacgttgctactctcaaagagtatctggat
gttttactgaaaggtaccaacatgaattgcctgactccaggtgccatcattggggaggaa
tgtcagtttttatcagcaaacttgtactctcattcttcattcggtgaagacgcccttgct
aatctgtgcatcgagaagcaagcagatgggccaattattggacatgtacgtattagatcc
aagggtcaaggtcttgcattgtcgatgggtgatcgagtcgcagcaatcgctcgccaatcc
aatacggctaccgtatcggttgtctag
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