Komagataella phaffii: PAS_chr4_0858
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Entry
PAS_chr4_0858 CDS
T01092
Name
(RefSeq) hypothetical protein
KO
K15147
mediator of RNA polymerase II transcription subunit 5
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppa03021
]
PAS_chr4_0858
Transcription machinery [BR:
ppa03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
PAS_chr4_0858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med5
ComK
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
8201256
NCBI-ProteinID:
XP_002494306
UniProt:
C4R952
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Position
4:complement(1611566..1614118)
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AA seq
850 aa
AA seq
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MDKISLGTVVQVCVARRSNPQLFNSLFKQLVHDVDSYGEVAETEVVNDLLNRIDQNDNSS
DLKLNYLVELLVEGDSVNSQNGETENDSDIGLITMPKLFAKYLPLLRLNDQYIVVNKISK
SINKGKFKNFYQHEYWSKVLGALNVYSKYLGGIMDNHFVVIRVYNSFLNLIDNLIDKCDN
GEDKKQFEIVKDILDGIQDCISERQGFEMIRNQVRAITKRFTAKFTGRKEIKKTRVNTLR
MVRLKKLMWLDYQVVTNYACLKTLDQMVQFLNGFTKILNVSENDLRNVKVSSSILYELLS
GCFESIDMLTPDKEMEKLAHDVWYHFIVVKVPLLVQKVFQFNQETLWTIMNSFETTSLLV
KDHFVVSCAAMDLIKAEKLSSSQLEILNDKHDLSFILETLSNTNPEFVSVEECEILVNLE
RSFPSYEHHRNYECKLQFLNEFGMLLEKFISSNDTSRLNRLLISCLGNERVMESFLLYHS
PYIVLRKLVTYASKWDIDSLSFNSNNTNTNDSTTIDADYANSIMDDDDNLQYFYFEFNIL
LLAMTYIYQHFNLKMNHVVSSIKGANRPDTVSFVLKFISSLQPNYAKVSYDDDLINEWVN
CLFLRNPPSGHAETGISDSLIKRTSIARMLRICPQILKESITCVHYKLINFDDHINNALE
LIVQPFLILTILPFLANSKEIQIRLSRLEHTKEQGLLKDTYHTLLKILSFLIDEKNSNDG
NEGKIMHKVIFGIVSNDVYQMIAYIHDKVELREDKVIQEFMERHRQVKTIESNFATNKGT
PFEIVDQNLSQLITWSQNKDAQAGGFCLHQCIIRVINSALEESISYPETSNITQMKKELL
GLVTELVVGR
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcagcttgggcactgttgttcaggtatgtgtagccagacgaagcaatccc
caacttttcaattctttgttcaaacaactggttcatgacgttgactcctatggcgaagtg
gcagaaactgaagtggtcaacgatcttcttaatcggatagaccaaaatgacaattccagc
gacctcaaacttaactatctggtagaattattagtagaaggagatagcgtcaatagtcag
aatggagagaccgaaaatgactcggatataggattgattactatgcccaagctgtttgct
aaatatttgccgttgttgaggctgaacgatcagtacattgtagtcaataagatcagtaaa
tcgatcaacaaagggaagttcaaaaacttttaccaacatgaatactggagcaaggtactg
ggtgcattgaatgtatacagcaagtatttgggcgggatcatggacaaccactttgttgta
ataagagtttataactcctttctcaacttgattgataatctgattgataaatgtgataat
ggcgaagataagaaacagtttgaaatagtgaaggatatattggatggcatccaggattgt
attagtgaacgtcaaggttttgaaatgattcgaaaccaggttcgagcgattacgaagaga
ttcacagctaaatttacaggtagaaaagaaataaagaagactagggtcaatacgttgaga
atggtcagactgaaaaagctaatgtggctggactatcaagttgttactaactatgcatgc
ctgaaaactttggatcaaatggttcagtttttgaatggatttaccaagatactgaacgtt
tcagaaaacgatcttagaaacgttaaagttagcagcagtattttgtatgagcttttgagt
ggttgctttgagagcattgacatgctcactccggacaaagaaatggaaaagctggcacat
gatgtctggtaccattttatcgttgttaaggtgcctttactggtgcagaaagtgttccag
tttaaccaagaaacactttggaccattatgaactcatttgagaccacttctcttcttgtg
aaagatcatttcgtggtttcatgtgcggccatggatctcattaaagctgaaaaactcagc
agctctcagttagagatattgaatgataaacatgacctgtctttcatactagaaacgctc
agcaataccaaccctgagtttgtatcggtggaagaatgtgaaatcttagtgaatttagag
agaagctttccctcatatgagcaccatcgtaattatgaatgcaagttacaatttctgaat
gagtttggcatgctattggaaaagttcatatcgtctaatgatacctccagattaaatcgt
ctgttaatcagctgtttgggtaatgaacgtgtgatggagtcgtttttactttaccattcc
ccatacattgttttaagaaaacttgtcacgtatgctagtaaatgggacatagattcttta
tctttcaacagcaacaataccaatactaacgatagcaccacaatagacgcggactacgct
aatagcattatggatgatgacgataatttacagtacttctattttgagttcaacattctg
ctgctagccatgacctatatataccaacattttaacctaaaaatgaatcatgttgtgtct
tccataaaaggggcaaacagaccagacacagtttcgtttgtcctaaagtttatttcgtct
ctacaaccaaattatgctaaagtgtcttacgatgatgatttgattaacgaatgggttaac
tgtctattcttgagaaacccaccttcggggcacgctgaaaccggaatttcggacagtttg
atcaaacgtacaagcattgctcgtatgttaagaatttgtcctcaaattctcaaagaaagc
atcacatgtgtacattacaaattgatcaactttgatgatcacatcaacaacgctttagag
ctcatagtacaaccgtttctcatcttaacaatacttccattcttagctaacagcaaggaa
attcaaatccgtttgtcccggctggagcataccaaggaacagggattgttaaaagacact
taccacaccctcctgaagattttatcatttcttattgacgagaaaaactcgaacgatgga
aacgaaggaaagatcatgcataaagtgatatttggcattgtctcaaatgatgtctatcag
atgattgcctatatacacgataaggttgaacttcgggaggacaaagttatccaagagttt
atggaacggcaccgtcaagtgaaaacaattgagtcgaattttgcaacaaacaaaggtaca
ccttttgaaattgtagaccaaaatctttcacaactcataacctggtctcaaaacaaagat
gcacaagcaggtgggttttgtttacatcaatgcatcatcagagtgatcaactcagcatta
gaggagagtattagttacccagaaacttcgaacattacccaaatgaaaaaagaactatta
ggacttgttaccgagcttgtagttggcagatag
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