Komagataella phaffii: PAS_chr4_0861
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Entry
PAS_chr4_0861 CDS
T01092
Name
(RefSeq) F-box protein involved in recycling plasma membrane proteins internalized by endocytosis
KO
K15071
recyclin-1
Organism
ppa
Komagataella phaffii
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppa04121
]
PAS_chr4_0861
Ubiquitin system [BR:
ppa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
PAS_chr4_0861
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec10_HB
Motif
Other DBs
NCBI-GeneID:
8200505
NCBI-ProteinID:
XP_002494310
UniProt:
C4R956
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Position
4:complement(1619258..1622044)
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AA seq
928 aa
AA seq
DB search
MADLLSGSLLENSDLLVLHSTRPLNMIPLVVIKLVSRNLPDVKDVLNFSIINRQVYNLVM
KDEVLWINFLKRIRIWKNGKVETSEIVDDLLLSMKISVGNPSLAFQQFKVCYTMYKPIVQ
DLLVTHYDNIQNSSILQKITSPKDQALLLNGLRKFVVYFKNVNFQLYQKLQIRLNSIVEM
FTSSLLREIDHHFSNETFEECHALIDSLHLLGEPAFDLTTRTGDHVDNMELILEFFINKF
ADDYSILYEVKETDIFLNVIGTSLQNERGVVKGYQLQFVKLDEVFEKLIVIFDREFTILE
HIFRPDVDGEISEVPIVLKLVETFLNNYLIGRFVDELITRAKEIDESEIIEFNQLVQARS
ISDSVLNEDSQNPWAQNNCVRSNSTQISGGHSCGDGNGLISENQYFNVMNESSLYFQLVP
YLYNKISLTFSKVRYPADSKIIDYPKLISELINFYYGQYSSEFIDLLPRQCHFSLIQLIN
RWQEELKKQEQSQENEIMQFVDEEQDTKGKKGFLLTSGKDILTGFTSIFKGSVQKEEAQR
VSETLEYSNRSQDQNAQQKRLTRFAAKLEILSHNLDNIKSLVSVDLTILILQHVKNTFLL
LLSLGDSSHLNKETEKKIATTCQEVFTDSVVTLTNGHVKIGFDEAIHRLKVYNPIDQGAQ
IAVEPLKMFVELVNNADLVNEMLKIFYQEELIDKHLVISKEKSKKDFLMVNNCEKSMSKL
ETLLDTYVADGLNTGIEVLMNEISYITMVELDEGIYSIRNEQDLLRKHLDPGVPTSFAQK
TIQVLRVHVNMLIGSIDKSIIDVFRQEIGERFVNDLVKLINKKLTISTIGAMFLINDLNF
MYNFFLELKLKPIVNYFIALRQIAQLYLIDSENSNEIGKLVVRIGKDNGMFTQEEVYEFV
TRRADWERIKKHVDKIIYGLQLQDCIIM
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggccgatctcttatcggggtccttacttgaaaactccgatctcttggtgttacattcc
actcgacctctcaacatgattcctttggtagttattaaactagtctcaagaaacctacca
gatgtcaaggacgttctcaacttcagtataatcaataggcaagtttataacttggtaatg
aaagacgaggtcttatggataaattttttgaagcggataaggatctggaagaacggtaag
gttgaaacttccgaaattgtggatgatttactacttagtatgaagatatctgttggcaat
ccctcgttagcttttcaacaattcaaagtctgttatactatgtataaaccaatagttcag
gatctcttagtaacacactatgataatattcaaaactctagcattctacagaaaatcact
tctcccaaggatcaagcattgttgcttaatggacttcgaaaatttgttgtgtatttcaag
aatgttaattttcagctataccaaaaattgcaaatacgtctcaattcaattgtggaaatg
ttcacaagtagtctattaagagagatagatcatcatttttccaatgaaacttttgaggag
tgtcatgctcttatagactcccttcaccttttgggagagcctgcatttgacttaacaact
agaactggtgatcatgttgacaacatggaattaatcttagaattcttcattaacaagttt
gccgacgattattcaatcctttacgaggtaaaagaaacggacatatttctcaacgttatt
ggtacatctctacagaatgaaagaggggtggtcaagggttatcaactgcaatttgtgaaa
ctggatgaggtttttgaaaagctcatagtcatttttgatagagagttcactatacttgaa
cacattttcagacctgatgttgatggtgaaatcagtgaagttcctatagtgttgaagctg
gttgaaacatttttgaataactatttaataggaaggtttgttgacgagttgataacgcgg
gcaaaagaaattgatgaaagtgaaattattgaatttaatcaactagttcaagcaagaagt
atttcagatagtgttttgaacgaagactctcagaatccctgggctcaaaataattgtgtt
cggtcaaattcaactcaaatctcagggggccatagttgcggtgatggaaatggattaatt
agtgaaaatcaatacttcaatgtgatgaatgaatcttctctctattttcaattggtgcct
tatttgtataacaagatatctcttactttttcaaaagttcgttatcctgcggattcaaag
attattgactaccccaaactgatatctgaattgattaatttctactatggtcagtattcc
tccgaatttattgatctgcttcctcgacagtgtcatttctctttgattcaattgataaat
aggtggcaggaggaacttaaaaaacaagaacagtctcaagaaaatgagataatgcagttt
gtggacgaggagcaggatacaaaagggaagaaaggatttcttctaacttcaggcaaagat
attttgactggattcactagcattttcaaaggtagtgttcaaaaagaggaggctcagagg
gtatcagaaacactggagtattcgaatcggagtcaggatcagaatgctcagcaaaagcgt
ctgactagatttgcggccaaattagagatactctctcataaccttgacaatattaaatct
ctcgttagcgtcgatttgacgatcttgattttacaacatgtgaaaaacacattcctattg
ttactctctctaggtgacagttcacatctcaacaaggaaactgaaaagaagattgcaaca
acttgccaagaagttttcactgatagtgtggtgacgttaacaaatgggcacgtaaagata
ggatttgatgaagcaatccatagactgaaagtatacaatccaattgatcaaggtgcacaa
attgctgtagagccactcaaaatgtttgtcgaattggtcaataatgctgatttagttaac
gaaatgttgaaaatattctatcaagaagaacttattgataaacatttggtgatatcaaag
gaaaagagtaaaaaggactttttaatggttaataactgtgaaaagtctatgagcaaactg
gaaactcttttggacacatatgtggctgacggcctgaatactggtatcgaggttcttatg
aatgaaattagttatatcaccatggtagaattagatgagggaatctatagtattaggaat
gaacaggatcttttgagaaagcatctggatccaggtgttcccacgagttttgcccagaag
actattcaagtgctcagagttcatgtcaatatgcttattggaagcattgataaatccatt
attgatgtgttcaggcaagagattggtgagagatttgttaacgatctagttaaacttatt
aataagaaactaacaataagcacaatcggagcaatgtttcttatcaatgacctaaacttt
atgtacaactttttcttggaattaaaactaaaaccaattgtgaactactttatagcactg
cggcaaattgcacagctctatttgattgatagcgagaactcaaacgaaatcggaaaattg
gtagtgagaattggaaaagacaatggaatgtttactcaggaagaagtatatgagttcgtt
actaggagagcagactgggaaagaattaaaaaacatgttgacaaaatcatctatgggcta
caattgcaggattgtattattatgtaa
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