Komagataella phaffii: PAS_chr4_0902
Help
Entry
PAS_chr4_0902 CDS
T01092
Name
(RefSeq) RNAP II-associated protein
KO
K15174
RNA polymerase II-associated factor 1
Organism
ppa
Komagataella phaffii
Pathway
ppa04011
MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:
ppa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
PAS_chr4_0902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppa03021
]
PAS_chr4_0902
Transcription machinery [BR:
ppa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
PAS_chr4_0902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
8201306
NCBI-ProteinID:
XP_002494351
UniProt:
C4R997
Structure
PDB
PDBj
LinkDB
All DBs
Position
4:complement(1692402..1693583)
Genome browser
AA seq
393 aa
AA seq
DB search
MTSSKSRQDYIAKVRYQNDLPAPPCPPKLLKYEIEKEAPQKEFLKDSRLLSALFSKDNFR
YLMNETSDGLDVNYLRIPGIIENEKSLGKLFSSYKNLAIENLHPDDRLLLVDPNKSATLN
EESPVFFLRRPQYVSDGEKINLQNFTNKRKHQDMEDTNPRSQLHSVERTFDEVIDPRNKN
RLQSLIHPRKKIKAVKAWHFFPDTSTFDQVFHSLKFVGSASLSKDRPLNEQLGQVSETDS
TSVNASILTSLFKPIEINPHNKWISLYAVTDKLSAESFRKSFNSIKDDNIVNRHVIYDHI
KDFDQMFRGHKKLFEDFAISFDDISDRAFFVPIVGRLELKKKRIVPGLVDMVNRTNYAHI
RMDLRNPSTQETAIRDSRREQYDPVNYSSIQEE
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgagtaagtccagacaagactatattgctaaagtccgttaccaaaacgatcta
cctgctccaccatgccctcctaagctactgaaatatgaaatcgaaaaagaggcccctcaa
aaagagtttttgaaagacagtagattgttatcggcactgtttagcaaagacaattttaga
tatctcatgaatgaaaccagcgatggattagatgtcaactacctacgcatccctgggatt
atcgaaaatgaaaaatctttaggcaaacttttctcatcatataagaatcttgctatagaa
aatcttcatccagacgaccgactactactggtcgatcccaacaaaagtgctactttaaac
gaggaatcacctgtttttttcttacgtagaccacaatatgtcagtgatggagaaaaaata
aatttgcagaattttacaaacaagagaaagcatcaggatatggaagacaccaatcctaga
tcgcagttacactctgttgaaagaacatttgacgaagttattgaccccagaaataagaat
cgccttcagagcttgattcatccaagaaaaaagatcaaagcagttaaggcttggcacttt
tttcctgatacctctacatttgatcaagtctttcattcactaaagtttgttggttcggcc
tctctttccaaagataggccccttaatgaacaattgggacaggtctccgaaactgattct
acttctgtcaatgcctcaattctcacctctttattcaaacctattgaaatcaatccccat
aacaaatggatatctctctatgcagttactgacaaattatcggcggagagttttagaaag
agctttaattcaatcaaggatgacaatattgtaaatcggcacgtaatttatgaccatatc
aaagattttgatcagatgtttcgtggccataagaaattattcgaagattttgctattagc
tttgatgacatctcggacagagcttttttcgtacctatcgtaggtcgcttggaattgaaa
aagaaaaggatagttccaggactggtagatatggtaaacagaaccaactatgcccatatc
cgtatggatttaagaaatcctagtactcaagagacagcgatcagagattcaagacgagaa
caatacgatcctgttaattactcctctattcaagaggaataa
DBGET
integrated database retrieval system
