Pseudomonas paraeruginosa: B7D75_00435
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Entry
B7D75_00435 CDS
T08722
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
ppaa
Pseudomonas paraeruginosa
Pathway
ppaa02025
Biofilm formation - Pseudomonas aeruginosa
ppaa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
B7D75_00435 (icmF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
B7D75_00435 (icmF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppaa02044
]
B7D75_00435 (icmF)
Secretion system [BR:
ppaa02044
]
Type VI secretion system
Imp/Vas secretion system core components
B7D75_00435 (icmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
RHH_1
T7_gp14
Motif
Other DBs
NCBI-ProteinID:
AVR65532
LinkDB
All DBs
Position
complement(93837..97367)
Genome browser
AA seq
1176 aa
AA seq
DB search
MKGFLNFFTRWVVPVLGLLALSLVIWFLGPLLRLGNYEPLASATSRWALIALLFLVWIGF
RVLRIVQARRNAAKVMQSLAEVSAPDAASVATAEELATLKQRMDEALALLKRAKLGGSER
RNLYELPWYVIIGPPGSGKTTALMNSGLDFPLAAQMGAGAIRGVGGTRNCDWWFTDEAVL
LDTAGRYTTQDSHAQVDKAAWLGFLDLLKTQRKRRPIDGAFIAISLSDLLLGSDAERAAH
AQAIRARIQELYQQLGVRFPIYVMLTKFDLVPGFMEFFDSLNREERAQVWGMTFALDDGK
SAEGPLAGFASEFALLEQRLTARLVERLQQERDPARRDLVYGFPQQFAALRECLGEFLNG
VFKPNPYEERPLLRGLYFTSGTQEGSPIDRLIGSMAQSMNLDRQHLARQTGTGRSYFIER
LFREVAFGERGLVGTNPKVERRRKWLTIGALSATALVVLAVTAVWIASYRANQSYIAAVD
QRVDPLARGIESLSPAQRDVLAVLPQLNAVQNLANDAPGWAEGYGLYQGDMLGEESASVY
RKLLIAVFAPRLVTRIEEQLRSGGSSDFLYEGLKAYLMLGSPDHYDADFIKAWISLDWER
NLPRDLSPEQRQALHAHLDALLERRPPSARLDQDLVEDLRRQLQQLPVAQRVYDRVKRQR
LPKDVPDFRISDAAGRDAPLVFARKSGKPLTDPLSGFFTYRGYREVFLTASLSQAGTIAE
EQWVLGRNLNDAGDAANLALDVRRLYFQDYLRQWDDLLADLTVVPITNVTQAADVLRILS
GPTSPFRKLLEAVARETDLQKGDRLVAAQVKKAADGTVDKLKQRLGSLVGQEEEGVREQP
QQADSDPISAHFAELNSLVSKGEGDNEPAPIDSLLEDMNTLYVQVSAMAGASGDSLLGDA
KNQVAAAASRVALSAERQPPVVQGLVKKVVNSTTSSMMGSVRNQLNAAWISDVVSVYRQS
LAGRYPIAAGSSRDATLEDFGHFFGAGGVMDSYFRQYLQPYVDTSASTWRWQPGAAQKLG
INPGVLHTFQRAAAIRDAFFRSGGMQPTVRFELKPVTMDAAISQFILDLDGQQLTYDHGP
SRPVAMQWPSANGLGVVRLTVTPPPSSGRSGLTLEGPWAWFRLLDQSDLERGNSPDRFTL
RLRIDGSSIACELRASSAFNPFKSRVVSGFSLPERL
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcttcctcaacttcttcacgcgctgggtggtgccggtgctcggcctgctcgcc
ctgagcctggtcatctggttcctcggcccgctgctgcgcctgggcaactacgagccgctg
gcctcggcgaccagccgctgggcgctgatcgccctgctgttcctggtctggatcggcttc
cgcgtgctgcgcatcgtgcaggcccggcgcaacgcggcgaaggtcatgcagagtctcgcc
gaggtcagcgcaccggacgccgccagcgtcgccaccgccgaagagctggcgaccctcaag
caacgcatggacgaggccctggccctgctcaagcgggccaagctgggcggcagcgagcgg
cgcaacctgtacgagctgccctggtacgtgatcatcggcccgcccggttcgggcaagacc
accgcgctgatgaactccggcctggacttcccgctcgccgcgcagatgggcgccggggcg
atccgcggggtcggcggcacgcgcaactgcgactggtggttcaccgacgaagcggtgctg
ctggacaccgccggccgctataccacccaggacagccatgcccaggtggacaaggccgcc
tggctgggcttcctcgacctgctcaagacccagcgcaagcgccgtcccatcgatggcgcg
ttcatcgccatcagcctctccgacctgctgctgggcagcgacgccgagcgcgccgcccac
gcccaggcgatccgcgcgcggatccaggagctgtaccagcagctcggcgtgcgcttcccg
atctacgtgatgctgaccaagttcgacctggtgccgggcttcatggagttcttcgacagc
ctgaaccgcgaggagcgcgcccaggtctggggaatgaccttcgccctcgacgacggcaag
agcgcggaaggcccgctggcgggtttcgccagcgagttcgcgctgctcgagcagcgcctc
accgcgcgcctggtcgagcgcctgcagcaggaacgcgacccggcgcggcgcgacctggtc
tacggcttcccgcagcagttcgccgccctgcgcgagtgcctcggcgagttcctcaatggc
gtgttcaagcccaacccctacgaggaacgcccgctgttgcgcggcctgtacttcaccagc
ggaacccaggaaggcagcccgatcgaccgcctgatcggcagcatggcgcagtcgatgaac
ctcgaccgccagcacctggcgcggcagaccggcaccgggcgcagctacttcatcgagcgg
ctgttccgcgaagtggcgttcggcgagcgcgggctggtcggcaccaacccgaaggtcgag
cgccgccgcaagtggctgaccatcggcgcgctgagcgccaccgcgctggtggtgctggcg
gtgacggcggtatggatcgccagctaccgcgccaaccagagctacatcgccgcggtcgac
cagcgcgtcgacccgctggcgcgcggcatcgagtcgctgagtccggcgcagcgcgacgtg
ctcgccgtgctgccgcagctcaacgcggtgcaaaacctcgccaacgacgcgccgggctgg
gccgaaggctacgggctgtaccagggcgacatgctcggcgaggagtccgccagcgtctac
cgcaagctgctgatcgcggtgttcgccccgcgcctggtgacccgcatcgaggaacagctg
cgctccggcggcagcagcgacttcctctacgagggcctgaaggcctacctgatgctcggt
agccccgaccactacgacgccgacttcatcaaggcctggatcagcctcgactgggaacgc
aacctgccgcgcgacctctcgccggaacagcgccaggcgctgcacgcgcacctcgacgcg
ttgctcgagcggcggccgccgtcggcgcgcctggaccaggacctggtcgaggacctgcgc
cgccagttgcagcaactgccggtggcgcagcgggtctacgaccgggtcaagcggcagagg
ctgcccaaggacgtgcccgacttccgcatcagcgacgccgccggccgcgacgcgccgctg
gtgttcgcgcgcaagagcggcaagccgctcaccgacccgctcagcggcttcttcacctac
cgcggctaccgcgaggtgttcctcaccgccagcctcagccaggccggcaccatcgccgag
gaacagtgggtgctcgggcgcaacctgaacgatgccggcgacgccgccaacctggccctc
gacgtgcgtcgcctgtacttccaggactacctgcggcagtgggacgacctgctcgccgac
ctcaccgtggtgccgatcaccaacgtcacccaggccgccgacgtgctgcgcatcctttcc
ggaccgacctcgccgttccgcaagctgctcgaggcggtggcccgcgagaccgacctgcag
aaaggcgaccggctggtcgccgcgcaggtgaagaaggccgccgacggcaccgtggacaag
ctcaagcagcgcctcggctcgctggtcggccaggaagaggagggcgtccgcgaacagccg
caacaggccgacagcgacccgatcagcgcgcacttcgccgaactcaacagcctggtcagc
aagggcgagggcgacaacgagccagcgccgatcgacagcctgctggaggacatgaacacc
ctctacgtacaggtcagcgccatggccggagccagcggcgactcgctgctcggcgacgcc
aagaaccaggtggccgccgccgcctcgcgcgtggctctgagcgccgagcgccagccgccg
gtggtccagggcctggtgaagaaggtggtcaactccaccaccagcagcatgatgggcagc
gtgcgcaaccagctcaacgcggcgtggatcagcgacgtggtcagcgtctaccggcaatcc
ctggccgggcgctacccgatcgccgccggcagctcgcgcgacgccaccctggaggacttc
ggccacttcttcggggccggcggggtgatggacagctacttccgccagtacctgcaaccc
tacgtcgacacctccgccagcacctggcgctggcagcccggcgcggcgcagaagctcggc
atcaaccccggcgtgctgcacaccttccagcgcgcggcggcgatccgcgacgccttcttc
cgctccggcggcatgcaaccgacggtgcgcttcgagctcaagccggtgaccatggacgcg
gcgatcagccagttcatcctcgacctcgacggccagcaactgacctacgaccacggcccg
agccgcccggtggcgatgcagtggccgagcgccaacggcctcggcgtggtccgcctgacc
gtgacgccgccgcccagcagcggccgctccgggctgaccctggaaggcccctgggcctgg
ttccgcctgctcgaccagtcggacctggagcgcggcaactcgccggaccgcttcaccctg
cggctgcgcatcgacggctccagcatcgcctgcgaactgcgcgccagcagcgccttcaac
cccttcaagagccgggtcgtgtccggtttcagcctcccggagcgcctttga
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