KEGG   Pseudomonas paraeruginosa: B7D75_02390
Entry
B7D75_02390       CDS       T08722                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppaa  Pseudomonas paraeruginosa
Pathway
ppaa02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ppaa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    B7D75_02390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppaa03021]
    B7D75_02390
Transcription machinery [BR:ppaa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     B7D75_02390
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Sigma70_ECF Rv2175c_wHTH HTH_24 MerR Sigma70_r3 HTH_17 FaeA HTH_AsnC-type
Other DBs
NCBI-ProteinID: AVR65891
LinkDB
Position
complement(506074..506592)
AA seq 172 aa
MAAGEVSNSEFVGSLYRDHRGWLLAWLNRNLGCRQRAEDLSQDTFVRLLGRPELPGLREP
RAFLAKVARGLLIDHFRRAALEQAYLAELALVPEAEQPSAEERYLILEDLREIDRLLGTL
SLKARSAFLYNRLDGMPHAEIAERLGVSVPRVRQYLAQGLRQCYIALYGEPR
NT seq 519 nt   +upstreamnt  +downstreamnt
gtggcggcgggtgaagtcagcaacagcgaattcgtgggtagcctgtaccgggaccaccgc
ggctggctgctcgcctggctgaaccgcaacctcggctgccgccagcgcgccgaagacctc
agccaggacaccttcgtccgcctcctcggccgcccggagctgcccggcctgcgcgaaccg
cgtgcgttcctggcgaaggtggcgcgcggcctgctgatcgaccacttccgccgcgccgcc
ctggagcaggcctatctcgccgaactggcgctggttccggaagcggagcagccttcggcc
gaagagcggtacctgatcctcgaggacctgcgcgagatcgaccgcctgctcggcacgctg
tcgctgaaggcgcgcagcgcgttcctctacaaccgcctggacggcatgccacacgccgag
atcgccgagcgtctcggggtctcggtgccgcgcgtgcgccagtacctggcccagggcctg
cgccagtgctacatcgccctctacggggaaccgcgatga

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