Pseudomonas paraeruginosa: B7D75_02390
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Entry
B7D75_02390 CDS
T08722
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppaa
Pseudomonas paraeruginosa
Pathway
ppaa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B7D75_02390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppaa03021
]
B7D75_02390
Transcription machinery [BR:
ppaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B7D75_02390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
Rv2175c_wHTH
HTH_24
MerR
Sigma70_r3
HTH_17
FaeA
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AVR65891
LinkDB
All DBs
Position
complement(506074..506592)
Genome browser
AA seq
172 aa
AA seq
DB search
MAAGEVSNSEFVGSLYRDHRGWLLAWLNRNLGCRQRAEDLSQDTFVRLLGRPELPGLREP
RAFLAKVARGLLIDHFRRAALEQAYLAELALVPEAEQPSAEERYLILEDLREIDRLLGTL
SLKARSAFLYNRLDGMPHAEIAERLGVSVPRVRQYLAQGLRQCYIALYGEPR
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtggcggcgggtgaagtcagcaacagcgaattcgtgggtagcctgtaccgggaccaccgc
ggctggctgctcgcctggctgaaccgcaacctcggctgccgccagcgcgccgaagacctc
agccaggacaccttcgtccgcctcctcggccgcccggagctgcccggcctgcgcgaaccg
cgtgcgttcctggcgaaggtggcgcgcggcctgctgatcgaccacttccgccgcgccgcc
ctggagcaggcctatctcgccgaactggcgctggttccggaagcggagcagccttcggcc
gaagagcggtacctgatcctcgaggacctgcgcgagatcgaccgcctgctcggcacgctg
tcgctgaaggcgcgcagcgcgttcctctacaaccgcctggacggcatgccacacgccgag
atcgccgagcgtctcggggtctcggtgccgcgcgtgcgccagtacctggcccagggcctg
cgccagtgctacatcgccctctacggggaaccgcgatga
DBGET
integrated database retrieval system