Pseudomonas paraeruginosa: B7D75_04645
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Entry
B7D75_04645 CDS
T08722
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ppaa
Pseudomonas paraeruginosa
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppaa03000
]
B7D75_04645
Transcription factors [BR:
ppaa03000
]
Prokaryotic type
Helix-turn-helix
Other families
B7D75_04645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
PAS_4
Diguanyl_cycl_sensor
AAA_5
HTH_22
HTH_23
PAS_8
PAS
PAS_9
HTH_7
HTH_20
HTH_30
HTH_AraC
HVO_A0261_N
HTH_50
PAS_7
HTH_17
Mg_chelatase
AAA_2
HTH_28
IclR_C
HTH_10
dnstrm_HI1420
HTH_Tnp_1_2
RWP-RK
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AVR66297
LinkDB
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Position
957492..959414
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AA seq
640 aa
AA seq
DB search
MPASSMSRHARQVLTVAQGKIPPGGPATDPSIARSWLRCLEQHHLDPGQPMAPMVLEHAR
MLERRERLQQVLEIADGEMHSLYQQLSGSDHAVLLTDARGVILNCVNADAQRQTFEHAGL
WLGADWSEPCEGTNGIGTCVVERQALTIQQEEHFRSRHTGLTCSASPVFDPQGELMAVLD
VSSARQEVSRQSQFHTMALVNLSAKIIEGCYFLRRFEGSWLLRFHVQGDYVGLFSEGLLA
FEEDGRIRAVNQSALNLLGCPRQRLLGQPVEAFFDCRLDDLLGRASPQPAASWPLRTREG
RTLYAMLRGAPRAIPQALVVPSVPAPPSAPGLCLGDAELAADFRRALKVYARDVPLLLNG
ETGSGKEAFAKAVHLAGPRARQAFVALNCAAIPETLIESELFGYRGGSFTGARKEGMRGK
LQQADGGTLFLDEIGDMPLALQTRLLRVLEERRVVPLGGEPQDVDVRLISATHRDLAGLV
ADGRFREDLYYRLNGMVLSLPPLRERSDREELLDYLLAEEARGQAIQLDAEVRRGLLAYR
WPGNVRQMRTVLRTLVALCEDGRVGLRDLPADIRQALAALPTAEAAPVAANSLEDAERVA
LLAALDGQRWHMSRVAEQLGISRNTLYRKLRRHGLVRGRA
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccagctccatgagccgccacgcgcggcaagtgctgaccgtcgcccagggcaag
atcccgccgggcggcccggccaccgacccgtccatcgcccgttcctggctgcgttgcctg
gagcagcaccatctcgatccgggccagccgatggctccgatggtgctcgagcacgcgcgc
atgctcgaacgccgcgagcgcctgcaacaggtgctggaaatcgccgacggcgagatgcac
agcctctaccagcagctttccggcagcgatcacgcggtgctgctcaccgacgcccgcggg
gtcatcctcaactgcgtcaacgccgacgcccagcgccagaccttcgagcacgccggcctc
tggctcggcgccgactggagcgaaccctgcgaagggaccaacggcatcggcacctgcgtg
gtcgagcggcaggccctgaccatccagcaggaagagcacttccgcagccgccacaccggc
ctgacctgctcggcgagcccggtgttcgacccacagggcgaactgatggcggtgctcgac
gtatcctcggcgcgccaggaggtgtcgcggcagagccagttccacaccatggcgctggtc
aacctgtcggcgaagatcatcgaaggctgctacttcctccgtcgcttcgagggttcctgg
ctgctgcgcttccatgtccagggcgactatgtcggcctgttcagcgagggtctgctggcc
ttcgaggaggacgggcggatccgcgcggtgaaccagagcgcgctgaacctgctcggctgt
ccgcgccagcgcctgctcggccagccggtggaagccttcttcgattgccgcctcgacgac
ctgctcggccgcgcctcgccgcaacccgccgccagctggccgctgcgcacccgcgaggga
cggaccctgtacgccatgttgcggggcgcgccgcgggcgatcccgcaggccctggtggtg
ccgtccgtacccgcgccaccgtcggcgccgggcctgtgcctgggcgacgccgagctggcc
gccgacttccgccgggcgctgaaggtctatgcgcgtgacgtgccgctgctgctcaacggc
gagaccggctccggcaaggaagccttcgccaaggccgtgcacctggccggaccgcgcgcg
cgccaggcgttcgtcgcgctgaactgcgcggcgatcccggaaactctgatcgagagcgaa
ctgttcggctaccgcggcggcagcttcaccggcgcgcgcaaggagggcatgcgcggcaag
ctgcagcaggccgacggcggcaccctgttcctcgacgagatcggcgacatgccgctggcc
ctgcagacccgcctgctgagggtgttggaagagcgccgggtggtgccgctgggcggcgag
ccgcaggatgtcgacgtgcgcctgatcagcgccacccaccgcgatcttgccggcctggtc
gccgatgggcgcttccgcgaggacctctactatcgcctcaacggcatggtcctcagcctg
ccgccgctgcgcgagcgcagcgaccgcgaggaactgctcgactacctgctggccgaggag
gccaggggccaggccatccagctcgatgccgaggttcgccggggcctgctggcctatcgc
tggccgggcaacgtccggcagatgcgcacggtgctgcggaccctggtggcgctctgcgag
gacggccgggtcggcctgcgcgacctgccggccgatatccgccaggccctggcggcgctg
ccgacggccgaggcggcgccggtcgccgccaacagcctggaggacgccgagcgcgtcgcc
ctgctggcggcgctggacggccagcgctggcatatgagccgggtcgccgagcaactcggg
atcagccgcaacacgctgtaccgcaagctgcgccgccacggcctggtgcgcggccgggcc
tga
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