Pseudomonas paraeruginosa: B7D75_06260
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Entry
B7D75_06260 CDS
T08722
Name
(GenBank) lytic transglycosylase F
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
ppaa
Pseudomonas paraeruginosa
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppaa01011
]
B7D75_06260
Enzymes [BR:
ppaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
B7D75_06260
Peptidoglycan biosynthesis and degradation proteins [BR:
ppaa01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
B7D75_06260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
NMT1
DUF5694
Motif
Other DBs
NCBI-ProteinID:
AVR66580
LinkDB
All DBs
Position
complement(1282293..1283765)
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AA seq
490 aa
AA seq
DB search
MFALTAYRLRCAAWLLATGIFLLLAGCSEAKAPTALERVQKEGVLRVVTRNSPATYFQDR
NGETGFEYELAKRFAERLGVELKIETADNLDDLYAQLSRAGGPALAAAGLTPGRQDDASV
RYSHTYLDVTPQVIYRNGQQRPTRPEDLVGKRIMVLKGSSHAAQLAELKKQYPELKYDES
DAVEVVDLLRMVDVGDIDLTLVDSNELAMNQVYFPNVRVAFDFGEARGLAWALPGGDDDS
LMNEVNAFLDQAKKEGLLQRLKDRYYGHVDVLGYVGAYTFAQHLQQRLPRYESHFKQSGK
QLDTDWRLLAAIGYQESLWQPSATSKTGVRGLMMLTNRTAQAMGVSNRLDPKQSIQGGSK
YFVQIRSELPESIREPDRSWFALAAYNIGGAHLEDARKMAEKEGLNPNKWLDVKKMLPRL
AQKRWYAKTRYGYARGGETVHFVQNVRRYYDILTWVTQPQMEGSQIAESGLHLPGVNKTR
PDDDEGDGKL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccctgaccgcgtaccgcttacgttgcgccgcctggctgttggcgaccggcatc
tttctgctgcttgcgggctgtagcgaggcgaaagcccctaccgccctggagcgcgtgcag
aaggagggggtgctgcgcgtggtcacccgcaacagcccggccacctacttccaggaccgc
aacggcgaaaccggcttcgagtacgaactggccaagcgcttcgccgagcgcctgggcgtc
gagctgaagatcgagaccgccgacaacctcgacgacctctacgcccagctctcccgcgca
ggcggcccggccctcgccgccgccggcctgaccccgggccgccaggacgacgccagcgtg
cgctactcgcacacctacctcgacgtcactccccaggtcatctaccgcaacggccagcag
cgcccgacccgtcccgaagacctggtcggcaagcgcatcatggtgctcaagggcagcagc
cacgcggcacagctcgccgagctgaagaagcagtatcccgaattgaagtacgacgagtcc
gatgccgtcgaggtggtcgacctgctgcgcatggtcgacgtcggcgacatcgacctgacc
ctggtcgactccaacgaactggcgatgaaccaggtgtatttccccaacgtccgggtcgcc
ttcgacttcggtgaagcccgcggcctggcctgggcactgccgggcggcgacgacgacagc
ctgatgaacgaagtcaacgcgttcctcgaccaggccaagaaggaaggcctgctgcagcgc
ctcaaggaccgctattacgggcacgtcgacgtgctcggctacgtcggtgcctacaccttc
gcccagcacctgcagcaacgcctgccgcgctacgaaagccatttcaagcagagcggcaag
caactggacaccgactggcgcctgctcgccgccatcggctaccaggagtcactgtggcag
cccagcgccacctcgaagaccggcgtgcgcggcctgatgatgctgaccaaccgcaccgcc
caggcgatgggggtgtccaaccggctcgacccgaagcagagcatccagggcggcagcaag
tatttcgtgcagatccgcagcgaactgcccgagagcatcagggagccggaccgcagctgg
ttcgccctggccgcctacaacatcggcggcgcgcacctggaagacgcgcgcaagatggcc
gagaaggaaggcctcaacccgaacaagtggctggacgtgaagaagatgctgccgcgcctg
gcacagaagcgctggtacgccaagacccgctacggctatgcccgtggcggcgaaaccgtg
cacttcgtgcagaacgtgcggcgctactacgacatccttacctgggtgacccagccgcag
atggaaggcagccagatcgccgagagcgggttgcacctgcccggcgtgaacaagacccgc
ccggacgacgacgaaggcgacggcaagctgtag
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