Pseudomonas paraeruginosa: B7D75_06950
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Entry
B7D75_06950 CDS
T08722
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ppaa
Pseudomonas paraeruginosa
Pathway
ppaa03030
DNA replication
ppaa03430
Mismatch repair
ppaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B7D75_06950
03430 Mismatch repair
B7D75_06950
03440 Homologous recombination
B7D75_06950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppaa03032
]
B7D75_06950
03400 DNA repair and recombination proteins [BR:
ppaa03400
]
B7D75_06950
Enzymes [BR:
ppaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B7D75_06950
DNA replication proteins [BR:
ppaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B7D75_06950
DNA repair and recombination proteins [BR:
ppaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B7D75_06950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AVR66713
UniProt:
A0ABD7K685
LinkDB
All DBs
Position
1438905..1442426
Genome browser
AA seq
1173 aa
AA seq
DB search
MTVSFVHLRLHTEFSLVDGLVRVKPLAKAVAGLGMPAVAVTDQSNMCSLVKFYKTAMGAG
IKPICGADIWLASREEDGPLSRLSLLAMNARGYRNLTELISRGWSEGQRNGEIIIERDWV
KAAAEGLIALSAAKEGEIGHALLDGEEAKAEALLREWMEVFPERFYVEVQRTSRVNDEEH
LHAAVALASRCNAPLVATNDVRFIRQEDFEAHETRVCIGEGRTLDDPRRPRTYSDQQYLK
SPAEMAELFSDLPEALENTVEIAKRCNIEVQLGKYFLPDFPTPNGMGIDDYLRHASFEGL
EERLEVLLPKDTPDYEARRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPVG
PGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFCMEGRDRVIDYVA
DAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQEE
MLRDFLKSDEEAAEIWEMALKLEGITRGTGKHAGGVVIAPTKLTDFSPIACDEEGGGLVT
QFDKDDVEAAGLVKFDFLGLRTLTIIKWAMEIINREQAKKGLEPVNIDFIPLDDKPTYAL
LQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGRA
ELSYPHPDYQYAGLEPVLKPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPEE
MAKQRGGFIEGCKNNGIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHFP
APFMAAVLTADMQNTDKVVTLIEECRHMKLRIVAPDVNNSEFRFTVDDDGRIVYGLGAIK
GVGEGPVEAITECRAEGGPFNTLFDFCDRVDLKRINKRTLEALIRAGALDRLGPHYHDEL
KAYQATVDLNRAVLLAAMEEAIQAAEQTARSHDSGHMDLFGGVFAEPEADVYANHRKVKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEVRRFARQRIVELKPARDTQTVAGLIVNLRVM
KNKKGDKMGFVTLDDRSGRIEASLFSEAFAAAQSLLQTDALVVVEGEVSQDDFSGGLRLR
AKRVMSLEEARTGLAESLRMKLHADLLKGDRLRWLGELFNRHRGSCPITLDYTSADAKAL
LQFGESWRVDPADDLIQALRDQFGRDNVFLNYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtatccttcgttcacctgcgtctgcataccgaattctccctggtcgacggcctg
gtccgggtcaagcccctggccaaggcggtggcgggactgggcatgccggcggtggcggtc
accgaccagagcaacatgtgttcgctggtgaagttctacaagaccgccatgggtgccggc
atcaagccgatctgcggggccgacatctggctcgccagccgcgaggaagacggtccgctc
agccgcctgagcctgctggcgatgaacgccaggggctaccgcaatctcaccgagctgatt
tcccgcggctggagcgaaggccagcgcaacggcgagatcatcatcgagcgcgactgggtc
aaggcggcggcggagggcctgatcgcgctgtccgcggccaaggaaggcgagatcggccac
gcgctgctcgacggcgaggaggccaaggccgaggcgctgttgcgcgaatggatggaggtg
ttccccgaacgcttctacgtcgaagtgcaacgcaccagccgggtcaacgacgaggagcac
ctgcatgcggcggtggccctggcgtcacgctgcaatgcgccgctggtggcgaccaacgac
gtgcgcttcatcaggcaggaagacttcgaggcccacgagacccgcgtctgcatcggcgag
ggacggaccctcgacgatccgcggcggccgcgcacctattcggaccagcagtacctgaag
tcgccggcggaaatggccgagctgttcagcgacctccccgaggcgctggagaacaccgtg
gagatcgccaagcgctgcaacatcgaggtgcagctgggcaagtacttcctgccggacttt
cccacgcccaatggcatgggtatcgacgactacctgcggcacgcttccttcgaaggcctc
gaggagcgcctggaggtgctgctgccgaaggataccccggactacgaggccaggcgccag
gtctacgtcgaccgtctgaacttcgagctcgacatcatcatccagatgggcttccccggt
tacttcctcatcgtgatggacttcatcaagtgggcgaagaacaacggcgtgccggtaggc
cccgggcggggctcgggcgccggctcgctggtggcttacgtgctgaagatcaccgacctc
gacccgctggcctacgacctgctgttcgaacgtttcctcaacccggaacggatctccatg
cccgacttcgacgtcgacttctgcatggaaggccgcgaccgggtgatcgactacgtggcc
gatgcctacgggcgcaacgcggtcagccagatcatcaccttcggcaccatggcggcgaag
gcggtggtgcgcgacgtggcccgggtccagggcaagtcctacggcctcgccgaccggctg
tcgaagatgatcccgttcgaagtcggcatgaccctggaaaaagcctacgagcaggaagaa
atgctccgcgacttcctcaagagcgacgaggaagccgccgaaatctgggagatggccctc
aagctggaaggcatcacccgtggtaccggcaagcacgccggtggcgtggtgatcgcgccg
accaagctgaccgacttctcgccgatcgcctgcgacgaggaaggcggcggcctggtgacc
cagttcgacaaggacgacgtggaggcggccggcctggtgaagttcgacttcctcggcctg
cggaccctgaccatcatcaagtgggcgatggagatcatcaaccgcgaacaggccaagaag
ggcctggaaccggtgaacatcgacttcattccgctggacgacaagccgacctacgcgctg
ttgcagaaagccgagaccaccgcggtgttccagctcgaatcgcgcggcatgaaggagctg
atcaagaagctcaagccggactgcctggaagacctcatcgccctggtggcgctgttccgc
ccgggcccgttgcagtcgggcatggtggacgacttcatcaaccgcaagcacggccgcgcc
gagctgtcctatccgcatcccgactaccagtacgccggcctggagccggtgctcaagcct
acctacggcatcatcctgtaccaggaacaggtgatgcagatcgcccaggtcatggccggc
tacaccctcggcggcgcggacatgctgcgccgggccatgggcaagaagaagccggaggaa
atggccaagcagcgcggtggcttcatcgagggctgcaagaacaacggcatcgatgccgac
ctggcgggcaacatcttcgacctggtggaaaagttcgccggctacggcttcaacaagtcg
cactcggccgcctacggcctggtctcctaccagaccgcctggctgaagacccacttcccg
gcgccgttcatggccgcggtgctcaccgcggatatgcagaacaccgacaaggtggtgacg
ctgatcgaagaatgccggcacatgaagctgcgtatcgtcgcgccggacgtgaacaactcc
gagttccgcttcaccgtcgacgacgacggccgcatcgtctacggcctgggtgcgatcaag
ggcgtcggcgaagggccggtggaggcgatcaccgagtgccgcgccgaaggcgggccgttc
aacaccctgttcgacttctgcgaccgcgtcgacctcaagcgcatcaacaagcgcaccctg
gaagcgctgatccgcgccggcgcgctggatcgcctcgggccgcactaccacgacgagctc
aaggcctaccaggccaccgtcgacctcaatcgcgcggtgctgctggcagcgatggaggaa
gcgatccaggccgcggagcagaccgcgcgcagccacgacagcgggcacatggacctgttc
ggcggggtcttcgccgagccggaggcggatgtctacgccaaccaccgcaaggtcaaggag
ctgaccctcaaggaacgcctgaagggcgagaaggacaccctcggcctgtacctgaccggc
cacccgatcgacgaatacgaaggcgaggtgcggcgcttcgcccgccagcgcatcgtcgag
ctgaagccggcgcgcgatacccagacggtggcagggctgatcgtcaacctgcgggtgatg
aagaacaagaagggcgacaagatgggcttcgtcaccctcgacgaccgctccgggcggatc
gaggcctcgctgttctccgaagccttcgccgcggcccagtcgctgctgcagaccgacgcg
ctggtggtggtcgagggcgaggtcagccaggatgacttctccggcggcctgcgcctgcgc
gccaagcgcgtgatgagcctggaggaggcgcgcaccgggctggcggagagcctgcggatg
aaactgcacgccgacctgttgaagggcgaccgcctgcgctggctgggcgaactgttcaac
cgccatcgcggttcctgtccgatcaccctggactacaccagcgccgacgccaaggccctg
ctgcagttcggcgagagctggcgggtggatccggcggacgatctgatccaggcattgcgt
gaccagttcgggcgcgacaacgtcttcctcaattatcgttaa
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