Pseudomonas paraeruginosa: B7D75_09335
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Entry
B7D75_09335 CDS
T08722
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ppaa
Pseudomonas paraeruginosa
Pathway
ppaa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B7D75_09335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppaa03400
]
B7D75_09335
DNA repair and recombination proteins [BR:
ppaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B7D75_09335
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B7D75_09335
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AVR67158
UniProt:
A0ABD7K337
LinkDB
All DBs
Position
1938989..1941001
Genome browser
AA seq
670 aa
AA seq
DB search
MDTFQLDSRFKPAGDQPEAIRQMVEGLEAGLSHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKTFFPHNSVEYFVSYYDYYQPEAYVPSSDTYIEKDSSINDHIEQ
MRLSATKALLERPDAIIVATVSSIYGLGDPASYLKMVLHLDRGDRIDQRELLRRLTSLQY
TRNDMDFARATFRVRGDVIDIFPAESDLEAIRVELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLEAVDQIKAELKERLDYLRNNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRAPGEPPPTLYDYLPANSLLVIDESHVSVPQVGAMFKGDRSRKETL
VEYGFRLPSALDNRPLRFEEWEAVSPQTIFVSATPGPYEAEHAGRVIEQVVRPTGLVDPE
IEVRPAMTQVDDLLSQIRQRVAKDERVLVTTLTKRMAEDLTDYLGDHDVRVRYLHSDIDT
VERVEIIRDLRSGAFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLHGKAILYADNVTGSMQRAIDETERRRAKQIAFNEAHGIVPKGVRKDIKDILEGAVV
PGARGKRKGVAKVAEESGRYDNELRSPSEISKRIRQLEEKMYQLARDLEFEAAAQLRDEI
QTLRERLVNV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggatacgttccaactcgactcgcgcttcaagcccgccggcgaccagccggaggccatc
cggcagatggtcgaggggttggaggcggggctttcgcaccagaccctgctcggagtgacg
gggtcgggcaagaccttcagcatcgccaacgtgatcgcccaggtgcagcgcccgaccctg
gtcctggcgccgaacaagaccctggcggcccagctctacggggagttcaagacgttcttt
ccgcataattcggtggagtacttcgtttcctactacgactactaccagccggaggcctac
gtaccatcctccgatacctatatcgagaaggactcgtcgatcaacgaccacatcgagcag
atgcgcctgtcggcgaccaaggcgctgctcgagcggccggatgcgatcatcgtcgccacc
gtgtcgtccatctacggcctcggcgaccccgcctcgtacctgaagatggtcctgcacctg
gaccgcggcgaccgcatcgaccagcgcgagctgctacgacgcctgaccagcctgcagtac
acccgcaacgacatggacttcgcccgcgcgaccttccgtgtgcgtggcgacgtgatcgac
atcttcccggccgaatccgatctcgaggcgatccgtgtcgagctgttcgacgacgaagtg
gaaagtctctcggccttcgacccgctcaccggcgaggtgatccgcaagctgccgcgcttc
accttctaccccaagagccactacgtgactccgcgcgagacgctgctggaggcggtcgac
cagatcaaagccgaactcaaggaacgcctggactacctgcgcaacaacaacaagctggtg
gaagcgcagcgcctggagcagcgcacgcgtttcgacctggagatgatcctcgaactgggc
tactgcaacggcatcgagaactactcgcgctacctttccgggcgcgcccccggcgagccg
ccgccaacgctctatgactacctgccggccaactcgctgctggtcatcgacgaatcgcac
gtcagcgttccgcaggtcggcgcgatgttcaagggcgaccgctcgcgcaaggaaaccctg
gtggaatacggtttccgtctgccttcggctttggacaatcggccgctgcgcttcgaagag
tgggaggcggtgagtccgcagaccatcttcgtttccgcgacccccgggccctacgaggcg
gagcatgccgggcgggtcatcgaacaggtggtacgacccaccggcctggtcgatccggag
atcgaggtgcgcccggcgatgacccaggtcgacgacctgctgtcgcagatccgccagcgc
gtggccaaggacgagcgggtgctggtgaccaccctgaccaagcgcatggccgaagacctc
accgattatctcggcgatcacgacgtgcgggtccgctacctgcactcggacatcgatacc
gtcgagcgggtggagatcatccgcgacctgcgctccggcgccttcgacgtgctggtggga
atcaacctcctgcgcgagggcctggacatgccggaggtatcgctggtggcgatcctcgac
gcggacaaggaaggtttcctgcgctcggagcgctcgctgatccagaccatcggtcgtgcc
gcgcgcaacctgcacggcaaggcgattctttacgccgacaacgtcaccggctcgatgcag
cgcgcgatcgacgagaccgagcggcggcgggccaagcagatcgccttcaacgaagcccac
ggcatcgtgcccaagggcgtgcgcaaggacatcaaggacatcctcgagggcgcggtggtg
cccggcgcgcgcggcaagcgcaagggcgtggccaaggtcgcggaggagagcgggcgctac
gacaacgaactgcgttcgccgagcgagatcagcaagcgcatccgccagctggaggaaaag
atgtaccagttggctcgcgacctggagttcgaagccgcggcgcaactgcgcgacgagatc
cagacgctgcgcgagcgcctggtcaacgtctga
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integrated database retrieval system
