Pseudomonas paraeruginosa: B7D75_10115
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Entry
B7D75_10115 CDS
T08722
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppaa
Pseudomonas paraeruginosa
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppaa03032
]
B7D75_10115 (topA)
03400 DNA repair and recombination proteins [BR:
ppaa03400
]
B7D75_10115 (topA)
Enzymes [BR:
ppaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
B7D75_10115 (topA)
DNA replication proteins [BR:
ppaa03032
]
Prokaryotic type
DNA Topoisomerases
B7D75_10115 (topA)
DNA repair and recombination proteins [BR:
ppaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B7D75_10115 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AVR67294
UniProt:
A0A2R3IXL2
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All DBs
Position
2110830..2113436
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AA seq
868 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGSQYVVKSSIGHIRDLPTSGSSSSKEPAAKGRKSAAEAP
ALSPKEKARRQLVSRMGVDPEHGWKAKYEILPGKEKVIEELRRLAKDADTVYLATDLDRE
GEAIAWHLREAIGGDESRYKRVVFNEITKKAIQEAFSQPGELDINRVNAQQARRFLDRVV
GYMVSPLLWQKIARGLSAGRVQSVAVKLVVEREREIRAFVPEEYWEVHADLGTAKGANVR
FEVTREKGEAFKPLNEAQAMAALEKLKASAYSVAKREDRPTSSRPSAPFITSTLQQAASN
RLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADAIGMVRGFIEDEFGQKYLPGKANVY
SSKEGAQEAHEAIRPSDVNLKPTQLSGMERDAERLYDLIWRQFVACQMTPAEYLSTSVTV
TAGDFELRAKGRILKFDGYTRVLPQQSKPGEDDVLPEMKEGENLKLIKLDPSQHFTKPPA
RYSEASLVKELEKRGIGRPSTYAAIISTIQERGYVTTHNRRFYAEKMGDIVTDRLNESFA
NLMDYGFTAGMEEHLDDVAQGERDWKHLLDEFYGDFKKKLEVAEVSEKGMRANQPTLTSI
PCRECGRPMMIRTASTGVFLGCSGYSLPPKERCKATVNLIPGDEIAADDEGESESRVLRG
KHRCPICSTAMDAYLLDEKHKLHICGNNPDCPGYEIEEGQYRIKGYEGPSLECDKCGSEM
QLKTGRFGKFFGCTNPTCKNTRKLLKNGEAAPPKMDAIRMPELKCEKVDDIYVLRDGASG
MFLAASQFPKNRETRAPLVSEIIPHKAELDPKYHYLCDAPQKDPDGRPAVIRFSRKTKEQ
YVQSEVDGKPTGWRAFYDGGKWKVEDKR
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcgctggtcatcgtggaatccccggccaaggccaagaccatcaacaagtac
ctgggcagccagtacgtggtgaagtcgagcatcggccacatccgtgacctgcccaccagt
ggttcgtcgagttccaaggagccggcggccaagggccgcaagagcgctgccgaggcaccg
gcgctgtcaccgaaggaaaaggcccggcgccaactggtctcgcgcatgggggtcgacccc
gagcatggctggaaggccaagtacgagatcctgcccggcaaggaaaaggtcatcgaggaa
ctgcgccgcctggccaaggacgccgacaccgtctatctcgcgaccgacttggaccgcgag
ggggaggccatcgcctggcacctgcgggaggccatcggcggcgacgaaagccgctacaag
cgcgtggtattcaacgaaatcaccaagaaggccatccaggaagccttctcccagcccggc
gaactcgatatcaaccgggtgaacgcccagcaggcgcggcgtttcctcgatcgcgtggtc
ggctacatggtctcgccgctgctctggcagaagatcgcccgcgggctgtccgccgggcgc
gtgcagtcggtggcggtaaagctggtggtcgagcgcgaacgcgagatccgcgccttcgtc
ccggaagagtactgggaagtgcatgccgaccttggtaccgccaagggcgccaacgtgcgc
ttcgaagtcacccgcgagaagggcgaggccttcaagccgctcaatgaagcccaggccatg
gcggccctggaaaagctgaaggcgtcggcctatagcgtcgccaagcgcgaggaccggccg
acctccagccgtccctcggcaccgttcatcacatccaccttgcagcaggcggcgagcaat
cgcctgggcttcggggtgaagaagaccatgatgatggcccagcgtctctacgaggcgggc
tacatcacctacatgcgtaccgactcgaccaacctgtcggccgatgccatcggtatggtc
cgcggtttcatcgaggacgagttcggccagaagtacctgccgggcaaggccaacgtctac
tcgagcaaggagggtgcccaggaggcgcacgaggcgatccgcccttccgacgtcaacctc
aagccgacccagttgtccggcatggagcgcgacgccgagcgcctgtacgacctgatctgg
cgccagttcgtggcctgccagatgaccccggccgagtacctgtccacgagcgtcaccgtc
accgccggcgatttcgagttgcgtgccaagggccgcatcctcaagttcgacggctacacc
cgggtcctgccgcagcagagcaagccgggcgaggacgacgtcctgccggaaatgaaggaa
ggcgagaacctcaagctgatcaagctcgacccgagccagcacttcaccaagccgccggcg
cgctattccgaagcgagcctggtcaaggagctggagaagcgtggtatcggtcgtccctcg
acctacgcggcgatcatctcgaccatccaggaacgcggctacgtcaccacccacaaccgc
cgcttctatgcggagaagatgggcgacatcgtcaccgatcggctcaacgagagcttcgcc
aacctgatggactacggcttcaccgccggaatggaagaacacctcgacgacgtggcccag
ggcgagcgtgactggaagcacctgctcgacgagttctacggcgatttcaagaagaagctc
gaggttgccgaagtcagcgagaagggaatgcgcgccaaccagccgaccctgaccagcatt
ccctgccgcgagtgcggccggccgatgatgatccgcacggcttccaccggagtgttcctc
ggttgctcgggctacagcctgccgccgaaggagcgttgcaaggcgaccgtcaacctgatt
cccggcgacgagatcgccgcggacgacgagggcgaatcggagtcgcgtgtgctgcgcggc
aagcaccgctgcccgatctgcagcaccgcgatggatgcctacctgctggatgagaagcac
aagctgcatatctgtggcaacaacccggattgcccgggttacgagatcgaagaaggccag
taccggatcaagggctacgaaggtccgagcctggagtgcgacaagtgcggaagcgagatg
cagttgaagactggccgtttcggcaagttcttcggttgcaccaacccgacctgcaagaac
acccgcaagctgttgaagaacggcgaggcggcaccgccgaagatggacgccatccgcatg
cccgagctgaagtgcgagaaggtggatgacatctacgtgctgcgcgacggtgcctcgggg
atgttcctggccgccagccagttcccgaagaatcgcgagacccgtgctccgttggtgagc
gagatcattccgcacaaggccgagctggatccgaagtaccactacctctgcgatgccccg
cagaaagacccggatggccgtcccgcggtgatccgtttcagccgcaagaccaaggagcag
tacgtgcagtccgaggtcgacggcaagcccaccggctggcgcgcgttctacgacggcggc
aagtggaaggtcgaagacaagcgctga
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