Pseudomonas paraeruginosa: B7D75_10935
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Entry
B7D75_10935 CDS
T08722
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ppaa
Pseudomonas paraeruginosa
Pathway
ppaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B7D75_10935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppaa03019
]
B7D75_10935
03009 Ribosome biogenesis [BR:
ppaa03009
]
B7D75_10935
Enzymes [BR:
ppaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B7D75_10935
Messenger RNA biogenesis [BR:
ppaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B7D75_10935
Ribosome biogenesis [BR:
ppaa03009
]
Prokaryotic type
rRNA helicases
B7D75_10935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Motif
Other DBs
NCBI-ProteinID:
AVR67449
UniProt:
A0ABD7JY70
LinkDB
All DBs
Position
2276983..2278686
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AA seq
567 aa
AA seq
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MGLCGCIRGKPMTQETVGFAALGIHPNVLAAITAVGYEEPSPIQAQSIPLILEGHDMIGQ
AQTGTGKTAAFALPLLSRIDPSRREPQMLVLVPTRELALQVATACETYSKQLPGVGVVAV
YGGAPMGPQLKALRQGAQILVATPGRLCDHLRRDEKLLATVQRLVLDEADEMLKLGFMDD
LEVIFEALPESRQTVLFSATLPASIRGIAERHLKQPKHVKIAAKTQTVARIEQVHLMVHA
DQKAGSIQRLLEVEQFDALIAFVRTKQATLDYAELLERQGYRAAALNGDMPQAQRERVIE
SLKDGSLDIVIATDVAARGLDVPRITHVLNIDMPYDPESYVHRIGRTGRAGREGRALLLV
TPRERRMLQVIERVTGQKVGEVRLPDPETVLEARLARLAASLSPLLESAVAQRGAVRDEL
CRRLDCDAETLAAALLARLTAGKALDLESVRREQPLTPSAPRERAERGERGERPERSGER
RPMAPPSEGRARCRTALGARDGVAAKNLLGAILNEGGLSREDIGRIQIRDTFSLIELPEA
NLERLLTKLKDTRVAGKALRLRRYRED
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgggtctttgcggatgtatacgaggcaaacccatgactcaggaaaccgtcggcttcgcc
gcgctcggtattcaccccaatgtgctcgcggcaatcaccgccgtaggctatgaagagcct
tcgcctatccaggctcaatcgattccgctgatcctcgaaggtcacgacatgattggccag
gcgcagaccggcaccggcaagaccgccgccttcgccctgccgctactgtcgcgcatcgac
ccgagccgccgcgagccgcagatgctggtgctggtgccgacccgcgagctggccctgcag
gtcgccaccgcctgcgaaacctattccaagcagttgccgggcgtcggcgtggtcgccgtc
tacggtggcgcacccatgggcccgcaactgaaggccctgcgccagggcgcgcagatcctc
gtcgctacccccggccgcctgtgcgatcacctgcgccgcgacgagaagctgctggccacc
gtccagcgcctggtgctcgacgaggccgacgagatgctcaagctcggcttcatggacgat
ctcgaagtgatcttcgaggcgctgcccgagtcgcgccagaccgtgctcttctcggcgacc
ctgccggcctccatccgtggcatcgccgagcgtcacctgaagcagccgaagcacgtcaag
atcgccgccaagacccagaccgtggcgcgcatcgagcaggtccacctgatggtccatgcc
gaccagaaggccggttcgatccagcgcctgctggaagtcgagcagttcgacgcgctgatc
gccttcgtccgcaccaagcaggccaccctcgactacgccgagctgctggagcgccagggc
tatcgtgccgccgcgctgaacggcgacatgccgcaggcccagcgcgagcgggtgatcgag
tcgctgaaggacggctcgctggacatcgtcatcgccaccgacgtcgccgcccgtggcctg
gacgtgccgcgcatcacccatgtactgaacatcgacatgccgtacgatccggagtcctac
gtgcaccgcatcggccgtaccggtcgtgccggccgcgagggccgcgccctgttgctggtg
accccgcgcgagcggcgcatgctgcaggtgatcgagcgggtcaccgggcagaaggtcggc
gaggttcgcctgccggaccccgagaccgtgctggaagcccgtctggcacgcctggccgcg
agcctctcgccgctgctggagagcgccgtcgcgcagcgcggcgcggtgcgcgacgaactc
tgccgccgcctggactgcgatgccgagaccctggccgccgcgctgctggcgcgcctgacc
gccggcaaggcgctggacctggagtcggtgcgccgcgaacagccgctgactccttcggcg
ccgcgtgagcgtgccgagcgcggtgagcgtggcgagcgtcccgagcgcagcggcgaacgc
cggccgatggcaccgccgagcgaaggccgggcccgctgccgcaccgccctgggcgcgcgc
gacggcgtcgcggcgaagaacctgctgggcgcgatcctcaacgagggcggcctgtcccgc
gaggacatcggtcgtatccagatccgcgacaccttcagcctgatcgagctgcccgaggcc
aacctcgagcgtttgctgaccaagctcaaggacacccgcgtcgccggcaaggccctgcgc
ctgcgccgctatcgcgaggactga
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