Pseudomonas paraeruginosa: B7D75_13745
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Entry
B7D75_13745 CDS
T08722
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppaa
Pseudomonas paraeruginosa
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppaa03032
]
B7D75_13745
03400 DNA repair and recombination proteins [BR:
ppaa03400
]
B7D75_13745
Enzymes [BR:
ppaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
B7D75_13745
DNA replication proteins [BR:
ppaa03032
]
Prokaryotic type
DNA Topoisomerases
B7D75_13745
DNA repair and recombination proteins [BR:
ppaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B7D75_13745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AVR67949
LinkDB
All DBs
Position
complement(2895903..2896904)
Genome browser
AA seq
333 aa
AA seq
DB search
MSAAPPPPPVLPADLCYVDDRQPGIRRRRQGKRFVYFDPDGQRIRDAERIHRLDQLAIPP
AYREVWICPDPAGHLQATGRDARGRKQYRYHPRWREVRDADKYERLLRFGQALPGLRRHI
DAQLRLPGLGRDKVVALAVALLDATLIRVGNHRYARDNRSYGLTTLRTRHVAVNGSRIRF
RFKGKSGIEHDVSLEHPRLARVLRRCLELPGQDLLQYLDEDGHPHRIGSHDINEYLRRQT
GEDFSAKDYRTWAGSALALERLRRVGADGLGAVVAEVAAELGNSVAICRQCYIHPAIIEA
YQAGQLGQLRRARKRRWLSAEEATLLAFLDTPG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagcgccaccgccaccccccgtcctgcccgccgacctgtgctacgtcgacgat
cgccagccgggcattcgccggcgccgccagggcaagcgcttcgtctacttcgacccggac
ggccagcgcatccgcgacgccgagcggatccatcggctggaccagctggccatcccgccg
gcctaccgcgaagtgtggatctgcccggacccggccggccatctccaggccaccggccgc
gacgcccgcgggcgcaagcagtaccgctatcacccgcgctggcgcgaagtacgcgatgcc
gacaagtacgagcgcctgctgcgcttcggccaggcgctgccggggctgcgccggcacatc
gacgcccagttgcgcctgcccggcctcggtcgcgacaaggtggtggccctggcggtggcg
ctgctcgacgcgaccctgatccgcgtcggcaaccaccgctacgcccgcgacaaccgttcc
tatggcctgaccacgctgcgtacccggcacgtcgccgtgaacggcagtcgcatccgtttc
cgcttcaagggcaagagcggcatcgagcacgacgtcagcctggagcatccgcgcctggcg
cgggtcctgcggcgctgtctggaactgcccgggcaggacctgttgcagtacctggacgag
gacggccacccccaccgcatcggctcccacgacatcaacgagtacctgcgccgccagacc
ggcgaggacttcagcgccaaggactaccgcacctgggccggcagcgccctggcgctggag
cgcctgcgccgggtcggggccgacgggctcggcgcggtggtggcggaggtcgctgccgaa
ctgggcaacagcgtggcgatctgccggcaatgctacatccatccggcgatcatcgaggcc
taccaggccggccaattgggccagctcaggcgcgcccgcaagcgccgctggctgagcgcc
gaggaagcgaccctgctggccttcctcgacacccccggctga
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integrated database retrieval system
