Pseudomonas paraeruginosa: B7D75_16525
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Entry
B7D75_16525 CDS
T08722
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
ppaa
Pseudomonas paraeruginosa
Pathway
ppaa02025
Biofilm formation - Pseudomonas aeruginosa
ppaa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
B7D75_16525 (icmF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
B7D75_16525 (icmF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppaa02044
]
B7D75_16525 (icmF)
Secretion system [BR:
ppaa02044
]
Type VI secretion system
Imp/Vas secretion system core components
B7D75_16525 (icmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
AAA_29
DUF4131
SRC-1
Motif
Other DBs
NCBI-ProteinID:
AVR68462
LinkDB
All DBs
Position
complement(3495836..3499363)
Genome browser
AA seq
1175 aa
AA seq
DB search
MKNFFKKVGAFLRKTWVWTLLLVLLAALLVWFVGPLLAVADYKFWESPTSRLLSISLMFL
VWGLAMVFVSWRAGVRRKAVEDSDEGQERLRRDGLIEDEQKELRSRFKDALRTLKTSSLY
RGRSERWRNELPWYLLIGPQGSGKTSLLDFSGLEFPINRIDRKLTRDTAGTRYCDWYFAD
HGVLIDTAGRYLTQADGEVDGGAWATLLGLLRKRRRARPLNGVMVSIPVETLLSDDEMAL
DTLARQVRARLQEIQQTLHLDLPVYLVLSKADQLLGFDEFFDQLSREESDQVLGTSFGKE
QNGTDVTVLRQAFEDLLRRLNSQVIMRIHQERDTLRRGRILDFPHQLGQIGERLCLFVEL
AFTGNRYQRASRLRGFYLTSAPHLAQQLDEDTAGIGANLGIASGLLPTLRNGRSRFIHHL
LSQVIFPEANLAGLDRRERTRIHWGQRALYVGSLALLLLFGLLWAGGFSANHERLERVRE
LAQQWAQQRQALGERDDAMAALKTLDSSYAATTVFPPKGEVSLHERAGLYQGNEVNPPLA
AAYRRELETQLLPRVARMLEAQIRGNMQNRERLLNSLRAYLMLNLRERRENGWLKDWVAT
EWSQRYAGNGTVQNGLNTHFARLLEQPFSYPLNDTLVAQARQVLRSESLANVVYRVLREQ
ARSLPEYRFGQHLGPQAGLFVGTDYVIPGFYTQQGYQQYFVVQGASLVNDILRDNWVLGE
GSGISDMDLRRLMVELEQLYFRDYANFWSEAVGRLGLLPFNDAGEGADQISGLLAANSPI
LQLLLEVRENTRFPVLAESAEALAEASDKAAEKGGKLGKAAAAAAGKARDALAKNLPDTA
KKSLQRRFEPLHRLLDDNNGPAADLTPLLQALNELQLQLAGLARASQPEHAAFDMAKNRM
GGQRDALSNLRNASARLPRPLGGWFSVLAEDAWRLVLGDAYLYLNQRYQSELYGFYSKAI
NKRYPFNAHSASDVAVSDFREFFKAQGVAERFFETYMRPFVSGDPGSYRLRSVDGYSLPM
SKVYLDQMGTAQVIRQSFFAENPGEPQVRFRLEPYTLDPGVSRAEFRFDGQSMEYRHGPI
VPMSFKWPSDADGGRTSLVLEKMAGRPVGIERNTGPWSLFRLFDLMQTEYLSGRDVMVLK
ADLGGLRANYLLLAQRTPNPFDLAVLRSFRMPVQL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacttcttcaagaaagtcggcgccttcctgcgcaagacgtgggtctggacgctg
ttgctggtactcctggcggcattgctggtgtggttcgtcgggccgctgctggcggtcgcc
gactacaagttctgggaaagcccgacctcgcggttgctgagcatcagcctgatgttcctg
gtctgggggttggcgatggtcttcgtcagctggcgcgccggagtgcggcgcaaggccgtc
gaggacagcgacgagggccaggagcgcctgcgccgcgacggtctgatcgaagacgaacag
aaggaattgcgcagccgcttcaaggacgccttgcgcaccctgaagacctccagcctgtac
cgcggccgcagcgagcgctggcgcaacgagctgccctggtacctgctgatcggcccgcag
ggaagcggcaagaccagcctgctggacttttccggactggaattcccgatcaaccggatc
gaccgcaagttgacccgtgacaccgccggtacgcgctactgcgactggtacttcgccgac
cacggcgtcctgatcgacaccgccgggcgctacctgacccaagccgacggcgaggtcgac
gggggcgcctgggcgaccctgctcggcctgttgcgcaagcgccgccgcgcacggccgctg
aatggcgtgatggtgtcgattccggtggagacgttgctcagcgacgacgaaatggcgctg
gatacgctggctcgccaggtgcgcgcgcgtctgcaggaaatccagcagaccctgcacctc
gatctgccggtctacctggtgctgagcaaggccgaccagttgctcggcttcgacgagttc
ttcgaccagttgagccgcgaggagagcgaccaggtcctgggcaccagcttcggcaaggag
cagaacggcaccgatgtgacggtcctgcgccaggcgttcgaggacctcctgcgacgcctg
aacagccaggtgatcatgcgcatccaccaggaacgcgataccctgcgtcgcggtcgcatc
ctcgactttccgcaccagcttggccagatcggcgagcggttgtgcctgttcgtcgaactc
gccttcaccggcaatcgataccagcgcgccagccgcctgcgcggcttctacctgaccagc
gcgccgcacctggcccagcagctggacgaggacaccgccggcatcggcgccaacctgggg
atcgccagcggcctgctgccgaccctgcgcaacgggcgctcgcgcttcatccatcacctg
ctgagccaggtgatcttccccgaggccaacctggcaggtctcgatcgccgcgaacgcacg
cgcatccactggggccagcgcgccctgtacgtcggttcgctggcgctccttctgctattc
ggcctgctctgggctggcggtttctcggccaaccacgagcgcctggagcgggtccgcgag
ctggcgcagcaatgggcccagcagcgccaggcgcttggcgagcgcgacgacgccatggcg
gcgctgaagacgctggatagcagctatgcggcgaccaccgtgtttccgcccaaaggggaa
gtctcgctgcacgagcgcgccgggctgtaccagggcaacgaggtcaaccccccgctggcc
gctgcctatcgccgcgagctggagacgcaactgctgccgcgcgtggcgcggatgctcgaa
gcgcagatccgcggcaacatgcagaatcgcgaacgcctgctcaacagcctgcgggcctac
ctgatgctgaatctgcgcgagcgccgcgagaacggatggctcaaggactgggtggctacc
gaatggtcgcagcgctatgccggcaacggcaccgtgcagaatggcctgaacacgcatttc
gcccgtctgctcgagcaaccgttcagctatccgctgaacgacaccctggtggcccaggcg
cgccaggtgctgcgcagcgagtccctggccaacgtggtctaccgggtgctgcgcgaacag
gcgcgaagcctgcccgagtatcgtttcggccagcacctggggccgcaggccggtctgttc
gtcggcaccgactacgtgatcccggggttctatacccagcagggctaccagcagtacttc
gtggtccagggcgccagcctggtcaacgacatccttcgcgacaactgggtcctgggcgag
ggcagcgggatcagtgacatggacctgcggcgcctgatggtcgaactcgaacagctgtat
ttccgcgactacgcgaacttctggagcgaggcggtcggacgcctgggcctgctgccgttc
aacgatgccggagagggcgccgaccagatttccgggctgctcgccgccaactcgccgatt
ctccagttgttgctggaggtccgtgagaacacccgtttcccggtcctggcggagagcgcc
gaggcgttggcagaggctagcgacaaggccgcggaaaagggcggcaagctgggcaaggcg
gccgccgcggcggccggcaaggccagggacgcgttggcgaagaacctgccggataccgcg
aagaagtccctgcaacgccgcttcgagcccctgcatcgcctgctcgacgataacaacggc
ccggcggccgacctcaccccgctgttgcaggcgctcaacgagttgcagttgcaactcgcc
ggactggcgcgcgccagccagccggagcatgcggctttcgacatggcgaagaaccgcatg
ggcggccagcgcgatgccctgagcaacctgcgcaacgcctccgcgcgactgccgcgaccg
ctcggcggatggttcagcgtgctggccgaagacgcctggcggctggtcctcggcgatgcc
tacctgtacctcaaccagcgctaccagagcgagctgtacggtttctacagcaaggcgatc
aacaagcgctacccgttcaacgcgcacagcgccagcgatgtcgcggtcagcgattttcgc
gagttcttcaaggcgcagggcgtcgccgaacgtttcttcgaaacctacatgcggcccttc
gtcagcggtgacccgggcagctaccgcctgcgcagcgtggacggctacagcctgccgatg
tccaaggtctatctcgaccagatgggcacggcccaggtgattcgccagagcttcttcgcc
gagaacccgggcgagccgcaggtgcgcttccgcctggagccctataccctcgatcctggc
gtcagccgcgccgagttccgtttcgacggtcaatccatggaataccgccacggcccgatc
gtgccgatgtcgttcaagtggcccagcgacgccgacggcggccgcaccagcctggtgctg
gagaagatggccgggcgaccggtgggaatcgaacgcaataccgggccctggtcgctgttc
aggctgttcgacctgatgcagaccgagtacctcagcgggcgtgacgtgatggtgctcaag
gccgacctgggcggcctgcgcgccaactacctgctgctcgcccagcgcacgccgaatccg
ttcgatctcgcggtcctgcgcagcttccgcatgccggtgcagctctga
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