Pseudomonas paraeruginosa: B7D75_16560
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Entry
B7D75_16560 CDS
T08722
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
ppaa
Pseudomonas paraeruginosa
Pathway
ppaa02025
Biofilm formation - Pseudomonas aeruginosa
ppaa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
B7D75_16560 (clpV)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
B7D75_16560 (clpV)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppaa02044
]
B7D75_16560 (clpV)
Secretion system [BR:
ppaa02044
]
Type VI secretion system
Imp/Vas secretion system core components
B7D75_16560 (clpV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
AAA_22
AAA_16
AAA_7
Clp_N
TniB
nSTAND3
NACHT
AAA_25
Sigma54_activat
ResIII
NBD_SMAX1
AAA_30
AAA_24
Hpr_kinase_C
Med9
Motif
Other DBs
NCBI-ProteinID:
AVR68468
LinkDB
All DBs
Position
complement(3505053..3507686)
Genome browser
AA seq
877 aa
AA seq
DB search
MSMINVDLQQLIQALDADTRRDLEGSAERCVARGGSRVLVEDLLLGLLERPQGLLARALQ
DAAVDAGELNAALQARGEHSASRNPVFAPELVQWLQDALLLANLELGRSQIDQAALILAL
LRNPLRYAGSRYQPLLARLDIERLKDFALSQPLEGAPSGKPGGGESLLQRFTHNLTQQAR
DGKLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLASRIAAGEVPPALR
DVELLSLDMGLLQAGASVKGEFERRLKGVIDEVKAAPRPTILFIDEAHTLIGAGGQAGGS
DAANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLHEPSVAEAVTILRGL
ARVYEESHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPESLE
RLRGELAEGERQRQALRRDAEAGLPIDHEALQVLEERLAQAESERHVQEGQWNHQRELAE
RLLALRQQLARAREASREEQGGEADAEAFPADEHGGVEALEKALHETRQALADAQAQGRL
VSFEVCPRLVAEVISAWTGVPVEQLAREHNAKVVGFADDLRARIRGQEQAIRALDRSMRA
TASGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGERFITTINMSEFQEKHSVSRL
IGAPPGYVGYGEGGMLTEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDRGVANDGEGRE
IDFRNTLFLMTSNLASERIAALCRDGERPSPEILEDTIRPVLSQHFKPALLARMRVVPYY
PVGGRVLRELIGIKLDRLGERLARRHLAFDYSSALVDHLGERCIQSDSGARLIDHLLDTH
LLPLVADRLLQAMARDERLVRVHATLDEHGHVFCEFA
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgatcaacgtagacctgcaacaactgattcaggcgctggatgccgacacccgg
cgcgacctggagggctccgccgagcgctgcgtcgcccgcggcggcagcagggtactggtg
gaagacctgttgctgggcctgctggagcgtccccagggattgctggcgcgcgccctgcag
gatgccgcggtggacgccggcgaactcaacgccgcgttgcaagcgcggggcgagcacagt
gcctcgcgcaatccggtgttcgcgcccgagctggtgcagtggctgcaggatgcgctgttg
ctggccaacctcgaactgggccgtagccagatcgaccaggcggcattgatcctggccctg
ctacgcaacccgttgcgctatgccggcagccgctaccagccgctgctggcgcggctcgac
atcgagcggttgaaggatttcgcgctctcgcagccgctggagggcgcgcccagcggcaag
ccgggcggcggcgagtccctgttgcagcgtttcacccacaaccttacccagcaggcgcgc
gacggcaagctcgatccggtgctctgtcgcgacggggctattcgccagatggtcgacatc
ctggcccgtcggcggaaaaacaaccccatcgtggtcggcgaggctggcgtcggcaagacc
gccatcgtcgaaggcctggcctcgcggatcgccgcaggggaagtgccgccggcactgagg
gacgtcgagctgttgtccctcgacatgggcctgttgcaggccggtgccagcgtgaagggc
gagttcgagcggcgcctgaaaggcgtcattgacgaagtgaaggcggcgcccaggccgacc
atcctgttcatcgacgaggcccatacgctgatcggcgcgggcggtcaggccggcggctcg
gatgccgccaacctgctcaagccggccctggcacgcggtgagttgcgtaccatcgcggcg
acgacctgggccgagtacaagaagtatttcgagaaggacccggcgctggcccggcgtttc
cagcccgtgcaactgcatgagccgagcgttgccgaagcggtgacaatcctgcgtggcctg
gcccgtgtttacgaggaaagccacggtatctacctgcgcgacgacgcggtggtggcagcc
gccgaactgtccgcccgctacctggcgggtcgccagttgccggacaaggccgtcgacgtc
ctcgacaccgcctgtgcgcgggtgcgcatcagcctggcggcggcgccggagagtctcgag
cgcctgcgcggcgagctggccgaaggtgagcgccagcgccaggccctgcgccgcgatgcc
gaggcagggctgccgatcgaccacgaggccctgcaggtgctggaagaacgcctggcccaa
gcggaaagtgagcggcacgtacaagagggccagtggaaccatcagcgcgagctcgccgag
cgcctgctcgccctgcgccagcaattggccagggcccgcgaggcgagccgggaagagcag
ggcggcgaggcggacgcggaggctttcccggccgacgagcatggcggtgtcgaagccctg
gaaaaggcccttcacgaaacccgccaggcactcgccgatgcccaggcccaggggcggctg
gtcagtttcgaggtctgcccgcgcctggtcgccgaggtgatcagcgcttggaccggtgta
ccggtggagcaactggcgcgggagcacaatgccaaggtggtggggttcgccgacgacctg
cgggcgcgaatccggggccaggaacaggcgatcagggcactggaccgttcgatgcgcgcc
accgcgtcagggctgaacaagcccgatgcgccggtcggtgtgttccttctggtggggccg
agcggggtgggcaagaccgagaccgcgctggcgctagccgacctgctgtatggcggcgag
cgtttcatcaccaccataaacatgtccgaatttcaggagaagcactccgtctcgcgcctg
atcggtgcaccgcccggatatgtcggctatggcgagggtggcatgctcaccgaggcggta
cgccagaagccctattcggtggtgttgttggacgaagtggagaaggccgatccggacgtg
ctcaaccttttctaccagatattcgacaggggtgtagccaacgatggcgaagggcgcgag
atcgatttccgcaataccctgttcctgatgacctccaacctcgccagcgaacgtatcgct
gcgctttgccgggacggcgagcggccgtcccccgagattctcgaagacaccatccgcccg
gtgctcagccagcatttcaaaccggcgttgctggcacggatgcgggtggtgccgtactac
ccggtgggcggcagggtgctgcgagagctgatcgggatcaagctggaccggctcggcgag
cgcctggcccgccgccacctggctttcgactacagctctgcgctggtggatcacctgggt
gaacgttgcatccagagcgacagtggcgcccggctgatcgatcatctgctggacactcat
cttctgcctctggtggccgaccggttgctgcaggcgatggcgcgcgacgagcggctcgta
cgggttcacgcgacactcgacgagcacggacacgtgttctgcgagttcgcctga
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