Pseudomonas paraeruginosa: B7D75_16580
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Entry
B7D75_16580 CDS
T08722
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
ppaa
Pseudomonas paraeruginosa
Pathway
ppaa02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
B7D75_16580 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppaa02044
]
B7D75_16580 (tssC)
Secretion system [BR:
ppaa02044
]
Type VI secretion system
Imp/Vas secretion system core components
B7D75_16580 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
VMAP-M0
PBC
Motif
Other DBs
NCBI-ProteinID:
AVR68472
UniProt:
A0ABD7K7A1
LinkDB
All DBs
Position
complement(3511090..3512565)
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AA seq
491 aa
AA seq
DB search
MSTNAAQQNRNENGEYNILDSIIAETRLSPDDEAYDIARRGVSAFIEELLKPQNEGEPVK
KAMVDRMIAEIDAKLGSQMDEILHHPDFQALESAWRGLQLLVDRTNFRENIRIEILSVSK
EDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYLSPSSPDVKLMQYVSSV
ACMAHAPFVAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYVALTVP
RFLLRTPYDPEENPVKSFAYKETVANSHEHYLWGNTAYAFGTRLTDSFAKYRWCPNIVGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREFELAEEGFISLTMRKGSDNAAFFSA
SSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAAQIIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgaatgccgcacagcaaaaccggaacgagaacggtgagtacaacattctcgac
agcatcattgccgaaactcgcttgagcccggacgacgaggcctacgacatcgccaggcgc
ggtgtgtcggccttcattgaggaactgctcaagccgcagaacgaaggcgagccggtgaag
aaggcgatggtcgatcggatgatcgccgagatcgatgccaagctcggcagtcagatggac
gagatcctccatcatccggacttccaggccctggagtcggcctggcgcggcctgcaattg
ctggtcgaccgcacgaacttccgcgagaacatcaggatcgagatcctcagcgtatccaag
gaggacttgctggacgatttcgaggactcgccggaggtaatgcaatccggcctgtacaag
catatctacaccgcagaatatggacagttcggtggccagccggtcggcgcgatcatcgcc
aactactacctgtcgcccagctcgccggacgtcaagctgatgcagtacgtctccagcgtg
gcctgcatggcccacgcgccgttcgtggccgctgccgggccaaagtttttcggtctggag
agctttaccgggctgccggacctgaaggacctgaaggatcacttcgaaggcccgcagttc
gccaagtggcagagcttccgccagtccgaggattctcgctatgtggcgctgaccgtcccg
cgcttcctgctgcgcacgccctacgatccggaagaaaacccggtcaaatcgttcgcctac
aaggagaccgtggccaacagccacgagcattacctgtggggcaacaccgcctatgccttt
ggtaccaggctgaccgacagcttcgccaagtaccgttggtgcccgaacatcgtcgggccg
cagagcggcggcgcggtggaggacttgccgctgcatcacttcgaaagcatgggcgagatc
gagaccaagattcctaccgaggtgctggtgtccgatcgccgcgagttcgagttggccgag
gaaggcttcatttccctgaccatgcgcaagggtagcgataacgcagcgttcttttccgcc
agttcggtgcagaagccgaagttcttcggtatcagtgccgaaggcaaggctgcggagctg
aactacaagctcggtacgcaactcccgtacatgatgatcgtcaaccgcctggcccattac
ctgaaggtgctgcaacgcgagcaactgggctcttggaaggaacgcaccgacctggaactg
gaactgaacaagtggatccgccagtacgttgccgaccaggaaaaccccagcgccgaggtc
cgcggccggcgtcctctgcgtgccgcgcagatcatcgtcagtgatgtcgagggtgagccg
ggctggtaccgcgtcagcttgaacgtgcgtccgcacttcaagtacatgggggcggacttc
accctgtcgttggtcggcaagttggacaaggagtaa
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