Pseudomonas paraeruginosa: B7D75_20110
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Entry
B7D75_20110 CDS
T08722
Name
(GenBank) LysR family transcriptional regulator
KO
K19735
LysR family transcriptional regulator, quorum-sensing system regulator MvfR
Organism
ppaa
Pseudomonas paraeruginosa
Pathway
ppaa02024
Quorum sensing
ppaa02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B7D75_20110
02025 Biofilm formation - Pseudomonas aeruginosa
B7D75_20110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppaa03000
]
B7D75_20110
Transcription factors [BR:
ppaa03000
]
Prokaryotic type
Helix-turn-helix
LysR family
B7D75_20110
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AVR69117
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All DBs
Position
4239825..4240823
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AA seq
332 aa
AA seq
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MPIHNLNHVNMFLQVIASGSISSAARILRKSHTAVSSAVSNLEIDLCVELVRRDGYKVEP
TEQALRLIPYMRSLLNYQQLIGDIAFNLNKGPRNLRVLLDTAIPPSFCDTVSSVLLDDFN
MVSLIRTSPADSLATIKQDNAEIDIAITIDEELKISRFNQCVLGYTKAFVVAHPQHPLCN
ASLHSIASLANYRQISLGSRFGQHSNLLRPVSDKVLFVENFDDMLRLVEAGVGWGIAPHY
FVEERLRAGTLAVLSELYEPGGIDTKVYCYYNTALESERSFLRFLESARQRLRELGRQRF
DEAPAWQPSIVETVPRCSGPKALAYRQRAAPE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcctattcataacctcaatcacgtcaacatgttcctccaggtcatcgcctccggctcg
atctcttccgctgcgcgtatcctgcgcaagtcgcacaccgcggtcagctcagcggtgagc
aacctggaaatcgacctgtgcgtggagctggtccgtcgcgacggctacaaggtcgaaccc
accgagcaggcgctacgcctgatcccctacatgcgcagcctgctgaactaccagcagctg
atcggcgacatcgccttcaacctcaacaaggggccacgcaacctgcgggtgctgctggat
acggcaatcccgccatcgttctgcgacacggtgagcagcgtcctgctcgacgacttcaac
atggtcagcctgatacgcacctcgccggccgacagcctggcgaccatcaagcaggacaac
gcggaaatcgacatcgccatcaccatcgacgaggagttgaagatctcccgcttcaaccag
tgcgtgctcggctacaccaaggcgttcgtcgtcgcccatccccagcatccgctgtgcaat
gcttcgctgcacagcatcgcgagcctggccaactaccggcagatcagcctcggcagccgc
ttcggccagcattcgaacctgcttcgcccggtcagcgacaaggtgctcttcgtggagaac
ttcgacgatatgctgcgcctggtggaagccggcgtgggctggggcatcgcgccgcactat
ttcgtcgaggagcgcctgcgcgccggcaccctggccgttctcagcgagctgtacgagccg
ggaggcatcgataccaaggtgtattgctactacaacaccgcgctggagtccgagcgcagc
ttcctgcgctttctcgaaagcgcccgccagcgcctgcgcgaactgggccggcagcgcttc
gacgaggcgccggcctggcagccgagcatcgtcgagacggtgccacggtgctcaggcccg
aaggcgctcgcgtaccggcagcgcgccgcaccagagtag
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