Pseudomonas paraeruginosa: B7D75_20620
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Entry
B7D75_20620 CDS
T08722
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppaa
Pseudomonas paraeruginosa
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppaa03009
]
B7D75_20620
Enzymes [BR:
ppaa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
B7D75_20620
Ribosome biogenesis [BR:
ppaa03009
]
Prokaryotic type
ribosomal protein modification factors
B7D75_20620
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GFIT
Motif
Pfam:
TRAM_2
Radical_SAM
UPF0004
TRAM
RNase_II_C_S1
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AVR69206
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Position
4340432..4341754
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AA seq
440 aa
AA seq
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MSTPTPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYEDADVVVVNTCGFIDSAKAE
SLEVIGEAIAENGKVIVTGCMGVEEHAIRDVHPSVLAVTGPQQYEQVVTAVHEVVPPKTE
HNPLVDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLSEAERL
VKAGVKELLVISQDTSAYGVDLKYKTDFWNGQPVKTRMKELCEALSSMGVWVRLHYVYPY
PNVDDVIPLMAAGKLLPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKHWREICPELTIR
STFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANELGLEPVPDEVKQDRW
ERFMAHQQAISAARLQLKVGKEIEVLIDEVDEQGAVGRSWADAPEIDGNVFVDSDALKPG
DKVRVRITDADEYDLWAEPV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccccactcccaaagtcggtttcgtcagccttggctgccccaaggcgctggtc
gactccgagcgcatcctcacccagctgcgcatggaaggttatgaggtcgtcccgacctac
gaggacgccgacgtcgtggtggtcaacacctgcggtttcatcgacagcgccaaggccgag
tccctggaagtgatcggcgaagccatcgccgagaacggcaaggtcatcgtcaccggctgc
atgggcgtggaagaacacgcgatccgcgacgtgcatcccagcgtgctggcggtcaccggc
ccgcaacaatacgagcaggtggtcaccgcggtgcacgaagtggtaccgccgaagaccgag
cacaacccgctggtcgacctggtcccgccgcaaggcgtcaagctgaccccgcgccactac
gcctacctgaagatttccgaaggctgcaaccacagttgcagcttctgcatcatcccgtcc
atgcgcggcaagctggtcagccggccggttggcgacgtgctgagcgaggccgagcgcctg
gtcaaggccggggtcaaggaactcctggtgatttcccaggacaccagcgcctacggcgtg
gacctgaagtacaagaccgacttctggaacggccagccggtcaagacccgcatgaaggaa
ctctgcgaggcgctgagcagcatgggcgtgtgggttcgcctgcactacgtctacccgtac
cccaacgtcgacgacgtgatcccgctgatggccgccggcaagctcctgccgtatctcgac
atccccttccagcacgccagcccgaaggtgctcaaggccatgaagcgcccggccttcgag
gacaagaccctggcccggatcaagcactggcgcgaaatctgcccggaactgaccatccgc
tcgaccttcatcgtcggcttccccggcgagaccgaggaagacttccagtacctgctcgac
tggctcaccgaagcccagctcgatcgcgtcggctgcttccagtactccccggtggaaggc
gccccggccaacgaacttggcctggagccggtgccggatgaggtcaagcaggaccgctgg
gaacgcttcatggcccaccagcaggcgatttccgccgctcgcctgcagctcaaggtgggc
aaggaaatcgaagtgctgatcgacgaagtcgacgagcagggcgcggtcggccgctcctgg
gccgacgctccggaaatcgacggcaacgtgttcgtcgacagcgacgcgctgaagccgggc
gacaaggtccgcgtgcgcatcaccgatgccgacgagtacgacctctgggccgagccggtc
tga
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