Pseudomonas paraeruginosa: B7D75_21980
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Entry
B7D75_21980 CDS
T08722
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ppaa
Pseudomonas paraeruginosa
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppaa03400
]
B7D75_21980
DNA repair and recombination proteins [BR:
ppaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B7D75_21980
Archaeal homologous recombinant proteins
B7D75_21980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AVR70895
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Position
4627457..4628686
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AA seq
409 aa
AA seq
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MRLIHTSDWHLGQTLHGQDRDHEHARFLDWLLRQLEEQRADALLIAGDVFDTVNPPLKAQ
ERLYDFIVSVHQRLPQLEIVMIAGNHDSGARIELPAALMKRLNAHAIGRIGWIDESLDSD
RLLLPLHDADGQVAAWCLALPFLRPAEVTGGANGDDYLAGIRQVHERLVDAAEARREPGQ
ALVALSHAHMAGGAISEDSERNLIIGNVEALPASLFPEQIAYVALGHLHKPQKVAGQERI
RYSGSPLPLSFAEVNYRHQVLLVTLEGERLEDVQSLQVPRAVDLLRIGPAPLGDVLLQLA
GLADADLLDEHRPWLEVRVRLDEPQPDLRQQIESALQGKACRLVRIASEYRRRDEEQAPL
LGLDQLSPQELFSRAWESAYGSSPDAQALDDFASLLQSVELTTEEPSGK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcatccacacctccgactggcacctgggccagaccctgcacggccaggaccgc
gaccatgaacacgcgcgcttcctcgactggctgctgcgccagctggaggagcagcgcgcc
gatgccctgctgatcgccggtgacgtcttcgacacggtcaacccaccgctcaaggcccag
gagcgcctctacgacttcatcgtcagcgttcatcagcggctgccgcaactggaaatagtg
atgatcgccggcaaccacgactccggcgcgcgcatcgagttgccggcagcattgatgaaa
cgtctgaacgcccatgccatcggccgtatcggctggatagacgaaagcctcgacagcgat
cgcctgctgttacccctgcacgatgcagatggccaggttgccgcctggtgcctcgccctg
cccttcctgcgccccgccgaagtcaccggtggcgcgaacggcgacgactacctggccggc
atccgccaggtgcatgaacgcctggtcgacgccgcggaggctcgccgcgaaccgggacag
gcactggtcgccctcagccatgcgcacatggccggtggtgcgatttccgaagattccgag
cgaaacctgatcatcggcaatgtcgaggcgctacccgccagcctgtttccggagcagatt
gcctacgtagccctcggtcatctgcacaagccacagaaagtcgccggacaggagcgcatt
cgctacagcggctcgccgttgccgttgtccttcgccgaagtgaactaccgccaccaggtc
ctgctcgtcaccctggagggtgagcggctggaggatgtgcagagtctccaggtgccccgc
gccgtggacttgctgcggatcggtccggctccccttggcgatgtcctgctgcagctcgcg
gggctggccgacgccgatctgctggacgaacaccgtccctggctggaagtccgcgtacgc
ctggacgaaccgcagcccgacctccgccagcagatcgagagcgccctgcagggcaaggcc
tgtcgcctggtgcgtatcgccagcgagtaccggcggcgcgatgaggagcaggcgccgctg
ctcggtctcgaccagctcagcccgcaggagctgttcagccgtgcctgggaaagcgcctat
ggttccagcccggatgcgcaggcgctggacgacttcgccagcctgctgcagagcgtcgaa
ctgaccaccgaagagccctcggggaaataa
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