Pseudomonas paraeruginosa: B7D75_21995
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Entry
B7D75_21995 CDS
T08722
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ppaa
Pseudomonas paraeruginosa
Pathway
ppaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B7D75_21995 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppaa03400
]
B7D75_21995 (recB)
Enzymes [BR:
ppaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B7D75_21995 (recB)
DNA repair and recombination proteins [BR:
ppaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B7D75_21995 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AVR69456
UniProt:
A0A2R3IYW2
LinkDB
All DBs
Position
complement(4634513..4638247)
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AA seq
1244 aa
AA seq
DB search
MTAQMPAPLDPLDFPLHGSRLIEASAGTGKTFTIALLYVRLVLDHGGENAFGRPLSPPEI
LVVTFTDAATRELRERIRSRLTEAARCFAEPQASHDGLLVALRQQYPAERWPGCARLLRL
AAEWMDEAAVSTIHSWCYRMLREHAFDSGSLFTQNLETDQSELLAEVVRDYWRRNFYGLT
AQAAQAVASCYSGPEALGKALQPLLARQDADFRYADQALSAPESLAALLERGGDWYRQLD
QLDAQARAAWRAARVELETLLRELRPCLNGNSYRGKDSDETFDAWLQALADWSEGGDQPA
NLGKFGQTRIKLTAKRAAPEHPALRAIDAWAAHQEERPDIAPHLLLHALGEVGRELEVEK
QRRAEIGFDDLLTRLDRALQGPGGERLAQLIREQFPVALIDEFQDTDPVQYRIFERIYRI
AADPAGPQARETGLFMIGDPKQAIYAFRGADIHTYLRAREATRGRHYTLGRNFRSTAAMV
AAANRCFAFAEEHPRGAFRFAREGVENPLPFHAVDAQGRAERLSIDGAEAPAMTFWCLDA
EAGVLGSAAYRQEMAERSASAIRRWLSLADLGRAGFADEQGGWRALRPADIAILVRGRAE
AEAIRSALAARRLASVYLSDRDSVFDSQEAADLLHWLRACADPGADTLLRVALASRSLHL
DWATLERLNQDELFWERMVLRFRDYRRLWQTQGVLPMLRRLLADFELPARLLRHTDGERS
LTNLLHLAEWLQRAAVELDGEHALVRHLAEQLQSPGSEEILRLESDADLIKVVTIHKSKG
LEYPLVLLPFICSWKELDGNSGAPASFHEDGIPGQVVELARRKEQAARAYEQANDERLGE
DMRLLYVALTRARHSVWLGIAPLVAGNSRSPELHKGAMGYLLAGGAAISGEGLASCLAAL
RGECAGIVVEPAPPADAEPYVMGRGEALGQARETCRSSREKWWVASYSGLQLQASSGLED
DEAVAVAESQEPISAEEATFQEEGRSAEQPPPAVASAMRDDLHRFPRGPAPGTFLHGLLE
WAGREGFEAARADAPRRRELIARRCELRGWKDWAEPLDLWLEQYLAEPLRWPGGEASLAG
LLAYQVEMEFWFASHQVQAEAIDALVRRHTLGGAARPALAPTLLNGMFKGFVDLVFEHQG
RFYVADYKSNWLGADDGAYSPEAMAAAVLENRYDLQYVLYLLALHRQLQARLPDYDYDRH
VGGAVYLFLRGARAATQGLHFERPPRELIEDLDALFRGQSGVPR
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgactgcacagatgcccgcgcccctcgatccgctggatttcccgttgcacggcagccgc
ctgatcgaggccagcgccgggaccggcaagaccttcaccatcgccctgctgtatgtccgc
ctggtcctcgaccatggtggcgagaacgccttcggccggccgctgagtccgccggaaatc
ctcgtggtgaccttcaccgatgcggcgacccgtgagctccgcgagcgtatccgcagtcgc
ctgaccgaagcggcgcgctgcttcgccgagccgcaggcgagccacgacggcctgctggtc
gcgctgcgccagcaatatcccgccgaacgctggccgggctgcgcgcgtctgctacggctg
gccgccgagtggatggacgaggcagcggtgtcgaccatccatagctggtgctaccggatg
ctgcgcgaacacgccttcgacagcggcagcctgttcacccagaacctggaaaccgaccag
agcgaattgctcgccgaagtggtgcgggactactggcggcgcaatttctacggcctgacg
gcgcaggcggcgcaagccgtggccagctgctacagcgggccggaggcgctgggcaaggcc
ctgcagccgttgttggcgcggcaggacgccgatttccgctacgccgaccaggcgctgagt
gcgcccgagtcgctggcagccttgctggagcggggcggcgactggtatcgccagctcgac
caactggacgcgcaagcccgcgccgcctggcgcgcagcgcgcgtcgaactggaaacgctg
ctgcgcgagctgcgtccctgcctgaacggcaacagctatcgcggcaaggacagcgacgag
accttcgacgcctggttgcaggcattggcggactggagcgagggcggcgaccagccggcc
aacctgggcaagttcggccagacccggatcaagctcaccgccaagcgtgccgcgcccgag
catcccgcgctgcgggccatcgacgcctgggccgcgcatcaggaagagcgtcccgatatc
gctccccacctgttgttgcacgcgctgggcgaggtcggccgcgaactggaggtcgagaag
cagcggcgtgccgagatcggcttcgacgacctgctcacccgtcttgaccgcgccctgcaa
ggtcccggtggcgagcgcctggcgcagttgatccgcgaacagttcccggtggcgttgatc
gatgaattccaggacaccgacccggtgcagtaccggatcttcgaacgcatctaccggatc
gccgccgatcccgccgggccccaggcgcgggagaccggcctgttcatgatcggcgacccc
aagcaggcgatctatgccttccgcggcgccgacatccatacctacctgcgtgcgcgggaa
gccactcgcggccgccactacaccctcggcaggaacttccgctcgaccgccgccatggtg
gcggccgccaaccgctgtttcgccttcgccgaagagcatccgcgcggcgcctttcgtttc
gcccgcgagggggtggagaatccgctgccgttccatgcggtcgatgcccaggggcgcgcc
gaacgcctgtcgatcgatggtgccgaggcgccggcgatgacgttctggtgcctcgacgcc
gaagccggcgtgctcggctccgcggcgtatcgccaggaaatggccgagcgtagcgccagt
gccatccgccgctggctgagcctggccgacctgggccgcgccggcttcgccgacgaacag
ggcggctggcgggcgttgcgcccggcggatatcgccatcctcgtccgcggtcgcgccgag
gccgaggcgatccgtagcgcgttggcggcgcggcgtctggccagcgtctacctgtccgac
cgcgactcggtgttcgatagccaggaagccgccgacctgctgcactggctgcgcgcctgc
gccgacccgggcgccgataccctgctgcgggtcgccctggccagccgcagcctgcacctg
gactgggcgaccctggagcggctgaaccaggacgaactgttctgggaacggatggtcctg
cgcttccgcgactatcgtcgcctctggcagacccagggtgtgctgccgatgctgcggcgc
ctgctcgccgacttcgagctgccggcgcgcctgctgcggcataccgacggcgagcgcagc
ctgaccaacctgctgcacctggccgaatggctgcaacgcgcggcggtggagctggacggc
gagcatgcgctggtccgccacctcgccgagcagttgcagagccccggcagtgaagagatc
ctgcgcctggaaagcgacgccgacctgatcaaggtggtgaccatccacaaatccaagggc
ctggaatatccactggtactgctgcccttcatctgcagctggaaggaactggacggcaat
agcggcgcaccggccagtttccacgaggacggcatcccggggcaggtggtcgagctggcg
cggcgcaaggagcaggccgcacgcgcctacgagcaggccaacgacgagcgtctcggcgag
gacatgcgcctgctctacgtggccctgacccgtgcgcggcactcggtgtggctgggcatc
gcgccgctggtggcgggcaacagccgatcacccgaactgcacaagggcgccatgggctac
ctgctcgccggcggcgccgcgatcagcggcgagggtcttgcgagctgcctcgccgcgctg
cgtggcgaatgtgcggggatcgtcgtcgagccggcgccgccggcggatgccgaaccctat
gtgatggggcgcggcgaggcgctcgggcaggcgcgcgagacctgccgcagcagccgcgag
aaatggtgggtcgccagctattccggcctgcagttgcaggcttccagcgggttggaggac
gacgaggcggtcgccgtcgccgagtcgcaggagccgatcagcgccgaggaagccactttc
caggaagagggccgctccgccgagcagccgccgcccgccgtcgccagcgcgatgcgcgac
gacctgcaccgcttcccgcgcggcccggcgcccggcaccttcctccacggcctgctcgag
tgggccgggcgcgaaggcttcgaggcggcccgggcggatgccccgcgtcgtcgcgagctg
atcgcccggcgctgcgaactgcgtggctggaaggactgggccgaaccgctcgacctgtgg
ctggaacagtatctcgccgaaccgttgcgctggcccggcggcgaagccagcctggccggg
ctgctcgcctaccaggtggaaatggagttctggttcgccagccaccaggtccaggccgag
gcgatcgacgccctggtccgccgccatacccttggtggcgcggcgcgcccggcgctggcg
ccgaccctgctgaacggcatgttcaagggcttcgtcgatctggtcttcgagcaccagggg
cgtttctacgtggccgactacaagtccaactggctgggcgccgacgacggcgcctacagc
ccggaagcgatggccgccgcggtgctggagaaccgctacgacctgcaatacgtcctctac
ctgctggccctgcaccggcagttgcaggcgcgcctgcccgattatgactacgaccgccac
gtgggtggcgccgtctacctgttcctccgcggcgcccgcgcggcgacccagggcctgcat
ttcgaacgaccgccgcgcgaactgatcgaggacctggacgctctgttccgcggccagtcg
ggagtcccgcgatga
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