Pseudomonas paraeruginosa: B7D75_22170
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Entry
B7D75_22170 CDS
T08722
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
ppaa
Pseudomonas paraeruginosa
Pathway
ppaa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
B7D75_22170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppaa03400
]
B7D75_22170
Enzymes [BR:
ppaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
B7D75_22170
DNA repair and recombination proteins [BR:
ppaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
B7D75_22170
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B7D75_22170
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B7D75_22170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AVR69488
LinkDB
All DBs
Position
complement(4677294..4678736)
Genome browser
AA seq
480 aa
AA seq
DB search
MTVNASIFWYDYETTGIDPRRDRPLQIAGIRTDEALNEIGEPMNLYCRPSDDILPHPMAC
LITGITPQRLAERGLSEADFMTRVHAQLAHPATCVAGYNSLRFDDEVTRYSLYRNFFDPY
AREWQGGNSRWDLIDMVRTAYALRPEGIQWPEADGRVSLKLELLTAANGLEHGQAHDALS
DVRATIALARLIRQRQPRLYDYLYQLRSKHRVLDQIHLLQPLVHVSGRFSAERHFLSVVL
PLAWHPRNRNALIVCDLRADPAPLLELSAEELRRRLYTRRDELAEGELPVPLKQIQVNRC
PVVAPLSVLRAEDRLRTGIDVEACQRRAELLRQRQAAWTEKLALAYSEESFVASEDPEQQ
LYDGFIGDRDRRLCEQLRRAEPEQLAREQWPFDDIRLQELFFRYRARNFPETLSPSERQQ
WEAFCRNRLSHEEFGAPNTLPAFEAAMEACRQEQGGTLPAVLAAWRDYAGELRRRYALDN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgaacgcgagtattttttggtacgactacgaaaccaccggcatcgacccccgt
cgcgaccgcccgctgcagatcgccggcatccgcaccgacgaggcgctgaacgagatcggc
gagccgatgaacctctattgccgccccagcgacgacatcctgccgcacccgatggcctgc
ctgatcaccggcatcaccccgcagcgcctggccgagcgggggctctccgaggccgacttc
atgacccgggtccacgcccagctggcgcacccggcgacctgcgtggccggctacaactcg
ctgcgcttcgacgacgaggtgacgcgctacagcctgtaccgcaacttcttcgatccctat
gcccgcgaatggcagggcggcaacagtcgctgggacctgatcgacatggtccgcaccgcc
tacgccctgcgccccgaaggcatccagtggccggaagcggacggtcgcgtatcgctgaag
ctggaactgctcaccgcggcgaatggcctggagcacggccaggcccacgacgcgctgtcc
gacgtccgcgcgaccatcgccctggcccgcctgatccgccagcgccagccacgcctgtac
gactatctctaccagttgcgcagcaagcacagggtgctcgaccagatccacctgctgcag
ccgctggtgcacgtctccgggcgcttttccgccgagcgtcatttcctctccgtggtcctg
ccgctggcctggcacccgcgcaaccgcaatgccctgatcgtctgcgacctgcgcgccgac
cccgcgccgttgctggagctgtccgccgaggagctgcgccggcgcctgtatacccggcgc
gacgagctggccgaaggcgagctgccggtgccgctgaagcagatccaggtgaaccgttgc
ccggtggtggcgccgctgtcggtgttgcgtgccgaggatcgcctgcgcacaggcatcgat
gtcgaggcctgccagcggagagccgagctgttgcgccagcggcaggctgcctggacggaa
aaactggccctcgcatatagcgaggaaagtttcgtcgccagcgaagaccccgaacaacag
ttgtatgacggatttatcggcgaccgcgaccggcgcctttgcgaacagctgcgtcgcgcc
gaaccggagcagttggccagagaacaatggccgtttgacgatatccgcttgcaggaattg
ttcttccgttatcgtgcgcgcaatttcccggaaactttaagtcccagcgagcgacaacaa
tgggaggcgttctgccgcaatcgtttgtcccatgaagaattcggtgcgccgaatactttg
ccggccttcgaggcggcaatggaagcctgtcgacaagagcagggcgggacattgccggcg
gtacttgcggcctggcgcgattatgccggggaactgcgtcgacgctatgcgctggacaac
tga
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