Pseudomonas paraeruginosa: B7D75_22970
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Entry
B7D75_22970 CDS
T08722
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
ppaa
Pseudomonas paraeruginosa
Pathway
ppaa02020
Two-component system
ppaa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B7D75_22970
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B7D75_22970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppaa03021
]
B7D75_22970
Transcription machinery [BR:
ppaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B7D75_22970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
CCDC14
HTH_IclR
HTH_21
Motif
Other DBs
NCBI-ProteinID:
AVR69638
LinkDB
All DBs
Position
4840018..4841511
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AA seq
497 aa
AA seq
DB search
MKPSLVLKMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEDGDDFDGSD
PLADGAEQATSAPQESALQESTTPSVESLDDDQWSERIPSELPVDTAWEDIYQTSASSLP
SSDDDEWDFTARTSSGESLHSHLLWQVNLAPMSDTDRMIAVTIIDSINNDGYLEESLEEI
LAALDPELDVELDEVEVVLRRIQQLEPAGIGARNLRECLLLQLRQLPPATPWLDEALRLV
SDYLDLLGGRDYGQLMRRMKLKEDELRLVIELIQCLHPRPGSQIESSEAEYIVPDVIVRK
DNERWLVELNQEAMPRLRVNATYAGMVRRADSSADNTFMRNQLQEARWFIKSLQSRNETL
MKVATQIVEHQRGFLDYGEEAMKPLVLHDIAEAVGMHESTISRVTTQKYMHTPRGIFELK
YFFSSHVSTAEGGECSSTAIRAIIKKLVAAENAKKPLSDSKIAGLLEAQGIQVARRTVAK
YRESLGIAPSSERKRLV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatcgctagtcctcaagatgggccagcagctgacgatgacgcctcagctgcaa
caggccatacgcctcctccagctctccaccctggacctccagcaggaaatccaggaagcg
ctggaatccaatcccatgctcgaacgccaggaagacggcgacgatttcgacggcagcgac
ccgctcgccgatggcgccgaacaggcaaccagcgcgccgcaggagagcgccctccaggaa
agcaccacgcccagcgtagaaagcctcgacgacgaccagtggagcgagcgcatccccagc
gaactgccggtggataccgcctgggaggacatctaccagaccagcgccagcagcctgccc
agcagcgacgacgacgaatgggacttcaccgcgcgcaccagcagcggcgagagcctgcac
agccacctgctctggcaggtgaacctggcgccgatgtcggacaccgaccgcatgatcgcg
gtgaccatcatcgacagcatcaacaatgacggctatctggaggagtccctcgaggagatc
ctcgccgccctcgatccggagctggacgtcgagctcgacgaagtcgaagtcgtgctgcgc
cgcatccagcagttggagcccgccggcatcggcgcccgcaacctgcgcgagtgcctgttg
ctgcaactgcgccagctgccacccgccacgccctggctggacgaagccctgcgcctggtt
tccgactacctcgacctgctcggcggccgcgactacggccagttgatgcggcgcatgaag
ctcaaggaagacgagttgcgcctggtcatcgagttgatccagtgcctgcatccacggccc
ggctcgcagatcgagtcgagcgaggccgaatacatcgtcccggacgtcatcgtgcgcaag
gacaacgagcgctggctggtggaactgaaccaggaggcgatgccacgcctgcgtgtcaac
gccacctatgccggcatggtccgccgtgccgacagcagtgccgacaataccttcatgcgc
aaccagttgcaggaagcgcgctggttcatcaagagcctgcagagccgcaacgagaccctg
atgaaggtggcgacgcagatcgtcgaacaccagcgtggctttctcgactacggcgaggaa
gccatgaagccgctggtcctgcacgacatcgccgaagcggtgggcatgcacgagtcgacc
atttcgcgggtcaccacgcagaagtacatgcatacgccgcgcggtattttcgagctgaaa
tatttcttttcaagtcacgtcagcaccgccgaaggcggggaatgctcgtccaccgcgatc
cgcgcgatcatcaagaaactggtggccgcggaaaatgcgaaaaagccattgagcgacagc
aagatcgctggtttactggaggcacagggcattcaagtggctcgccgcaccgtcgccaag
taccgcgaatccctgggcatagccccttcgagcgagcgcaagcgactggtgtga
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