Pseudomonas paraeruginosa: B7D75_25750
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Entry
B7D75_25750 CDS
T08722
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ppaa
Pseudomonas paraeruginosa
Pathway
ppaa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
B7D75_25750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppaa03019
]
B7D75_25750
03009 Ribosome biogenesis [BR:
ppaa03009
]
B7D75_25750
Messenger RNA biogenesis [BR:
ppaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B7D75_25750
Ribosome biogenesis [BR:
ppaa03009
]
Eukaryotic type
Pre-60S particles
RNases
B7D75_25750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AVR70136
LinkDB
All DBs
Position
complement(5422195..5422737)
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AA seq
180 aa
AA seq
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MQNPQNLIWIDLEMTGLDPDRDVIIEMATIVTDSDLNTLAEGPVIAIHQPEEVLAGMDEW
NTRQHGQSGLTQRVRESTVSMAEAEAQTLAFLEQWVPKRSSPICGNSICQDRRFLYRHMP
RLEGYFHYRNLDVSTLKELAARWAPQVRESFKKGNTHLALDDIRESIAELRHYRDHFIKL
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacccgcagaaccttatctggatcgacctggagatgaccggcctcgatccggac
cgggacgtcatcatcgagatggccaccatcgtcaccgacagtgacctcaacaccctggcc
gaaggcccggtgatcgccatccaccagccggaggaagtcctcgccggcatggacgagtgg
aatacccgccagcacggccagtccgggctcacccagcgggtccgggaaagcaccgtgagc
atggccgaggccgaggcgcagaccctggccttcctcgagcagtgggtgcccaagcgcagt
tcgccgatctgcggcaacagcatctgccaggaccgccgcttcctctataggcacatgccc
aggctggaaggctatttccactaccgcaacctcgacgtctcgaccctcaaggaactggcc
gcgcgctgggcgccgcaggtccgcgaaagcttcaagaagggcaacacccacctggcgctg
gacgatatccgcgagtcgatcgccgaactgcgccactaccgcgaccacttcatcaagctc
tga
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