Pseudomonas paraeruginosa: B7D75_27160
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Entry
B7D75_27160 CDS
T08722
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ppaa
Pseudomonas paraeruginosa
Pathway
ppaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B7D75_27160 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppaa03021
]
B7D75_27160 (rho)
03019 Messenger RNA biogenesis [BR:
ppaa03019
]
B7D75_27160 (rho)
Transcription machinery [BR:
ppaa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
B7D75_27160 (rho)
Messenger RNA biogenesis [BR:
ppaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B7D75_27160 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA_22
NACHT
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AVR70399
LinkDB
All DBs
Position
complement(5739340..5740599)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKPIAELLEMSDAMGLENMARSRKQDIIFALLKKHAKSGEEISGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIIGKIRPPKEGERYFALLKVDSIN
FDRPENAKNKILFENLTPLFPNERMKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP
KAGKTIMLQNIASNITRNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTILATALVETGSKMDEVIYEEFKGTGNMELPLDRKIAEKRVFPAINI
NRSGTRREELLTSEDELQRMWILRKILHPMDEISAIEFLIDKLKQTKTNDEFFDSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaccgaactcaagcaaaagccgattgccgaactgctggaaatgtccgatgcc
atgggcctggaaaacatggcccgttcgcgcaagcaggacatcatcttcgccctgctgaag
aagcacgcgaaaagtggtgaagagatctccggcgatggcgtgctggagattcttcaggac
ggcttcggcttcctgcgctccgccgactcttcctacctggccggtcccgacgacatctac
gtgtcgccgagccagatccggcgcttcaacctgcgcacgggcgacaccatcatcggcaag
attcgcccgccgaaagagggcgagcgctatttcgccctgctcaaggtcgattcgatcaac
ttcgatcgcccggagaacgcgaagaacaagatcctcttcgagaacctcacgccgctgttc
cccaacgagcggatgaagatggaggccggcaacggctccaccgaagacctgaccggccgc
gtcatcgacctctgcgcgccgatcggcaagggccagcgtggcctgatcgtggcaccgccg
aaggcgggcaagaccatcatgctgcagaacatcgccagcaacatcacccgcaacaatccc
gaatgccacctgatcgtcctgctgatcgacgagcgccctgaggaagtgaccgaaatgcag
cgcaccgtgcgcggcgaagtggtcgcctcgacctttgacgagccgccgacccggcacgtg
caggtcgccgagatggtcatcgagaaggccaagcgcctggtcgagcacaagaaggacgtg
gtcatcctgctcgactccatcacccgcctggcgcgggcctacaacaccgtgatcccgagt
tccggcaaggtcctcaccggcggtgtcgacgcccatgccctggagaagccgaagcgcttc
ttcggcgccgcgcggaacatcgaggaaggcggttctcttactattctcgccacggcgctg
gtggaaaccggctcgaagatggacgaggtgatctacgaggaattcaagggcaccggtaac
atggagcttccgctggatcgcaagatcgccgaaaagcgtgtgttcccggccatcaacatc
aaccgctccggtacccgtcgcgaagaactgctgaccagcgaggacgaactgcagcggatg
tggatcctgcgcaagatcctgcacccgatggacgagatttccgccatcgagttcctcatc
gacaagctcaagcagaccaagaccaacgatgagttcttcgattcgatgaaacggaagtag
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