Paenibacillus pabuli: KET34_00040
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Entry
KET34_00040 CDS
T09669
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ppab
Paenibacillus pabuli
Brite
KEGG Orthology (KO) [BR:
ppab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppab03032
]
KET34_00040 (gyrA)
03400 DNA repair and recombination proteins [BR:
ppab03400
]
KET34_00040 (gyrA)
Enzymes [BR:
ppab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KET34_00040 (gyrA)
DNA replication proteins [BR:
ppab03032
]
Prokaryotic type
DNA Topoisomerases
KET34_00040 (gyrA)
DNA repair and recombination proteins [BR:
ppab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KET34_00040 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTase_sub_bind
Motif
Other DBs
NCBI-ProteinID:
UPK44046
LinkDB
All DBs
Position
7889..10444
Genome browser
AA seq
851 aa
AA seq
DB search
MAEEMNSQIKDRDIGVEMRESFMDYAMSIIVSRALPDVRDGLKPVHRRILYAMSELGMTP
DKPHKKSARIVGEVIGKYHPHGDSAVYETMVRMAQDFSLRYMHVDGHGNFGSVDGDMAAA
MRYTEARLSKIAMEMLRDINKDTIDFQPNYDGEESEPIVLPARFPNLLVNGVGGIAVGMA
TNIPPHNLGEVIDGVQAMIKNPDITSMELMDYIQGPDFPTSGYILGRSGIRQAYQTGRGS
VTMRAKTNIEENNNKARIVVTELPYQVNKARLVEKIAELVRDKKIDGITDLRDESDRTGM
RIVIELRRDVNPGVVLNNLYKHTSMQSTFGINMLAIVNKEPKILNLREVLYHYLQHQIEV
IRRRTQFELKKAEARAHILEGLRIALDHIDEIIALIRSSSNTDAAREGLIERFSLSHDQA
QAILDMRLQRLTGLERERIENEYNELMVKIKEYREILANEHLVLEIISTELQEIRDRFSD
DRRTEITVGEESILDEDLIPREEVIITITHTGYVKRLPVSTYRSQKRGGRGVVGMDTKDT
DFVEHLFVTNSHNYLMFFTDKGKVYRLKAYEIPELGRTARGTPIINLIQIEQGESVNAVI
PVQEFESDKYLFFATRQGVVKKTPLEDYTNIRKGGLIGISLRDDDALIDVKLTDGQQEII
MGTAHGMSIRFSEGNVRSMGRSATGVKGITLDEQDVVIGMDVVDQELDVLIVTAKGYGKR
TPVSDYRMQTRGGKGIKTINVTEKNGAVVSLKMVKTEEDLMIITSSGTLIRMSMEGISTM
GRYTQGVKLIHIRDEDAVATVSRIDKNEEEPDDEELLEGEGSANSEGAESTLDEGVVSDA
EVEGDDSGSEA
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaaatgaactcgcagattaaagatcgggatattggcgtcgagatgcgtgaa
tcgtttatggattatgcgatgagcatcattgtgagccgtgccttacctgacgtgcgtgac
ggattgaagccggttcaccggcgtattctgtacgcaatgtcggagcttggcatgacacct
gataagccacataagaaatcagccagaatcgtcggcgaagttatcggtaagtatcacccg
cacggtgactctgccgtatacgaaacgatggtacggatggcacaggatttctccctgcgc
tatatgcacgtagatggacatggtaactttggatcggtggatggcgatatggcagcagcc
atgcgttatacggaggcccggttgtccaagattgcaatggaaatgctcagagacatcaat
aaggacacgattgacttccagccgaactatgacggggaagaaagtgaacctatcgttctg
ccagcccgtttccctaacttgctggtcaatggtgtcggcgggattgcagtaggtatggcg
accaatattcctcctcataacctgggagaggtcattgacggtgtacaggctatgattaaa
aacccggatataacctccatggaattgatggattacattcaggggccagacttccctaca
tccggttatattttgggacgctcgggcattcgtcaagcgtatcaaaccggacgtggatca
gtaacgatgcgggccaaaaccaacatcgaagagaacaacaacaaggctcggatcgtggtt
acagaactcccttaccaggtgaacaaggcaagactcgtcgagaaaattgccgaattggta
cgcgacaagaagattgatggtattacggatctccgtgatgaatctgaccgtacgggtatg
cggattgtaattgagcttcgcagagacgtgaatccgggggttgtgctcaacaatctgtac
aagcatacttcgatgcagtctaccttcgggatcaacatgcttgcgattgtaaataaagaa
ccaaagattctgaatctgcgtgaagtgttgtatcactacttgcagcatcagattgaggtt
atacgtagacgtacgcagttcgaattgaaaaaggccgaagcccgtgcacatatcttggaa
ggcttgcgcattgccctggatcatattgacgaaattattgcgttaattcgttcatccagc
aatacagatgcagccagagaaggtctgattgagcgattctcactaagtcatgatcaggct
caagctattctcgatatgcgtctgcagcgcctgacaggtctggaacgtgagcgcatcgaa
aatgagtataacgaactgatggtcaaaattaaggaataccgtgaaattctggccaacgag
catctggtgctcgaaattatcagcacggagctgcaagaaatccgtgatcgcttcagcgat
gatcgtcgtaccgaaatcacggtaggtgaagagagcattctggacgaggatttgattcca
cgtgaagaggttatcatcaccatcacccatacaggctatgtgaaacgtctgccggtatcc
acttaccgcagtcagaagcgtggcggccgtggggttgtgggaatggacacgaaagatacc
gactttgttgagcatctgtttgtgaccaactctcacaattatctcatgttctttaccgac
aaaggtaaagtgtaccgtctcaaagcttatgagatcccagagcttggacgtacagcacgg
ggaacgccgattatcaacctgattcagatcgagcagggtgaatcggtcaatgccgtgatt
ccagttcaggaattcgaaagtgacaagtatctgttctttgctacccgtcaaggggttgtg
aagaagacaccacttgaggattacacgaatattcgtaaaggcggactgatcgggatttcc
ctgcgtgatgatgatgcccttattgatgttaagctgacagacggacagcaagagatcatt
atgggtacagctcacgggatgtccattcgattctcggaaggaaatgtccgttctatgggg
cggagtgcaaccggggttaaagggatcacgctggatgagcaggacgtcgtaattggtatg
gacgttgtagatcaggaacttgatgttctaattgttacagcaaaaggttacggtaaacgt
acacctgtcagcgattaccggatgcagacgcgtggtggtaaaggtattaaaaccattaac
gttactgaaaagaacggcgcagtagtcagtctgaaaatggttaaaacggaagaggatctg
atgatcatcacttccagcggtacgttaattcggatgagcatggaaggcatatccacgatg
ggtcgatacacgcaaggcgtgaagctgattcatattcgtgatgaagatgctgtagctaca
gtcagccgaattgacaagaatgaagaagaaccagacgacgaagaattgctcgaaggtgaa
ggatctgctaattccgaaggtgcagagtcaactctggatgaaggcgtggtttccgatgct
gaagttgagggcgatgattcgggttccgaagcttag
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